| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5574 |
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| Symbol | |
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| ID | 6182501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 74542 |
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| End bp | 75984 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641688706 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001815570 |
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| Protein GI | 172064858 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA TCAACCCGCC GGTTCGCAAG CCGGTCGAAT CCGCACGCGT GAATCATGAT
CCGTCGCCGC AGGCAGGCGA CGATGTCGCA AGCGAAGACG CTACACGACG ACGCAGGCTG
TTACTGGCGC TGCTCGGCGT GGCGGTCGTC GTGTCGTCGG TCACATATGG CGTGTACTAC
CTGACGTATG CGCGCTACCA CGAATCGACC GACGACGCTT ACGTCAGCGG CAATCTCGTG
CAACTGACGC CGCAGGTGGC CGGCACCGTC GTGGCGGTGA ATGCCGACGA TACGCAGATC
GTGAAGGCGG GCGATCCGGT CGTCACGCTG GACAATGCAG ATGCGAAAGT CGCGCTCGGC
AACGCCGAAG CGGCGCTGGG GCAGATCGTT CGGCAGGTGA GCAGTCTGTA CGTGAACAAC
GATCTGTATG CCGCGAACGT CGCGCAGAGG CAGTCCGATC TCGTCCGCGC GCAGGACGAT
CTGCGCCGCC GTCAGGCCGT CGCCGATACG GGTGCCGTGT CGGCCGAAGA CATCGCGCAT
GCGCGCGACA ACGTAGCGGC CGCACGGGCC GCACTTGACG CCGCGCGTCA GCAGGCGGAA
GCCAACCGCG CATTGACAGC CCGCACGACG ATCGACCAGC ACCCGAATGT GCAAGCGGCC
GCGTCGAAAG TGCGCGATGC GTATCTCGCC TACGCGCGCA ACGTGCTGCC CGCGCCCGTC
ACGGGCTATG TCGCGAAGCG TTCGGCTCAG GTCGGTCAGC GCGTGTCGCC CGGCACGCCA
TTGATGGCGA TCGTGCCGCT CGATGGCGTG TGGGTCGATG CGAACTTCAA GGAAGGCCAG
TTGCGCAACA TGCGGGTCGG TCAACCCGTC ACGCTGACGG CCGACGTGTA CGGTGGAAAG
GTCACGTACC ACGGCCGCGT CGTCGGCTTC TCCGCAGGCA CGGGCAGCGC ATTCGCGAGC
TTGCCCGCGC AGAACGCGAC GGGCAACTGG ATCAAGATCG TGCAGCGTCT GCCCGCGCGT
ATCCAGATCG ACCGCAAGGA GCTCGACGCG CATCCGCTGC GTATCGGACT GTCGATGGAT
GTCGATGTGG ATACGCGCGA CGACACGGGC CCGCAACTCG GCGCGGCAAT GAACACGTCG
TATCGCACGG ACGTGTTTGC CGAGTACGGC GCACAGGCGG ATGCCGAGAT CGAGAAGATC
ATCGCGCGAA ACGTCGTCAT CGAGCATGCG GGGGCGACGG GGCCCGCCAG ATCGCCGACG
GCTTCCGCCA GGCACGACAT ACGAGACACA CAAGTCACGC GCGACACGAT GGCGCGCAAG
CTGAGCCGTG GACCCGGTGC GCGTTCCGGT CGCGCTCCGG TCGCGCTCCG GTCGATCCAA
TCGCCTGACC GGCCGGATCG ATACGCCGGC GCGGTCGATA CTTCAGGGGT GGAAACAAGA
TGA
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| Protein sequence | MSEINPPVRK PVESARVNHD PSPQAGDDVA SEDATRRRRL LLALLGVAVV VSSVTYGVYY
LTYARYHEST DDAYVSGNLV QLTPQVAGTV VAVNADDTQI VKAGDPVVTL DNADAKVALG
NAEAALGQIV RQVSSLYVNN DLYAANVAQR QSDLVRAQDD LRRRQAVADT GAVSAEDIAH
ARDNVAAARA ALDAARQQAE ANRALTARTT IDQHPNVQAA ASKVRDAYLA YARNVLPAPV
TGYVAKRSAQ VGQRVSPGTP LMAIVPLDGV WVDANFKEGQ LRNMRVGQPV TLTADVYGGK
VTYHGRVVGF SAGTGSAFAS LPAQNATGNW IKIVQRLPAR IQIDRKELDA HPLRIGLSMD
VDVDTRDDTG PQLGAAMNTS YRTDVFAEYG AQADAEIEKI IARNVVIEHA GATGPARSPT
ASARHDIRDT QVTRDTMARK LSRGPGARSG RAPVALRSIQ SPDRPDRYAG AVDTSGVETR
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