Gene BamMC406_5517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5517 
Symbol 
ID6181973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp909 
End bp1763 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content72% 
IMG OID641688650 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_001815514 
Protein GI172064802 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.480424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATC TTCGCGCCCA CACCATCGAC GAAGTGCTCG GCCGGCTGGC GGCCCAGCCG 
CGGCCGCACA TCGTGTGCGG GGCCACCGAC GCCTTCGCCG ATATCGGCCT CGTGCCCGCC
CGCTCGGCCT GGGTGGATAT CAGCCGCGTG AATGCATTGC GCGTGATCGA CCAGCACGAC
GGCATGATCC GCATCGGCGC GGCGAGCACC TGGGACGCCA TCGCGCGTAC GACCTGGCTG
CCCGTGGCGC TGACGGCCGC CGCCGCTTGC ATCGGCCCAC GGCAGATTCG CGTCCAGGGC
ACGATCGGCG GCAACGTGTG CCATGCGTCG CCGGTGGCGG ACGGCATCCC GGCGCTGCTG
GCGCTCGACG CGCGCGTCGA GCTGGCGAGC CTGCGCGGCG TGCGCCGCTT GCCATTGGCC
GAATTCCTGC TCGGCAACGG CCGGACCGCG CTGCACGCGG ACGAACTGCT GGTCGCCGTG
CTGCTTGCAC CACCGCACAC GCACGACCGC ACGTCGTTCA TCAAATGCAC GAATCGCGAC
GGCTCGGCGA TCGCCGTCGT TTCGGCCGCC GCGCAATTGC GCGTGGGCGC GGACGGCACG
GCCGACGCGG TCGCCGTCGC GATCGGCGGC ACATCCGACG TGGCGCGCCG GATGCCGGCG
CTCGAGGCGG CACTCGCGGG CCGGCGGCTC GACGAACTGG CCGGCGCGAT CGCGGCGGCG
CCGCTTGCCG AGCTGTCTCC GGTCGACGAC TGCCGGGCGA CCGCGTCGCA TCGCATTCAT
CTCGCGCGGC TGGCGGTCAC GCGCGCTTTC ACATGCTGCA TCGAGGAGAA CGCACGTGGC
GCATCCACTG CCTGA
 
Protein sequence
MNYLRAHTID EVLGRLAAQP RPHIVCGATD AFADIGLVPA RSAWVDISRV NALRVIDQHD 
GMIRIGAAST WDAIARTTWL PVALTAAAAC IGPRQIRVQG TIGGNVCHAS PVADGIPALL
ALDARVELAS LRGVRRLPLA EFLLGNGRTA LHADELLVAV LLAPPHTHDR TSFIKCTNRD
GSAIAVVSAA AQLRVGADGT ADAVAVAIGG TSDVARRMPA LEAALAGRRL DELAGAIAAA
PLAELSPVDD CRATASHRIH LARLAVTRAF TCCIEENARG ASTA