| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6742 |
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| Symbol | |
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| ID | 6181647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 229772 |
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| End bp | 230482 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685488 |
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| Product | integrase family protein |
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| Protein accession | YP_001812393 |
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| Protein GI | 172064743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCGAG AACGAGGAAG CATGGAACCA AAGCACGCTA AAGTCCTTAC CCCACCAAAA
TTCAGGCACC TTCTCGCCGT CACCGAGGAA ACCAGTCGAT TCCCTGAGCG CGACACACTG
ATCCTTCTCC TTGGCGTCAC CTGTGGAATG AGGATCACAG AAATTGCGCG GCTCGAGGTG
CATCACGTGC TCTCGCGGTC GGGCACCCGA CGAGAGGAGA TCGCCTTGCC CGGCTCGATC
ACAAAGGGAT GCCGGCCGCG CTGCGTCTTC CTCTCACATC CGAGAGCCCT CGAAGCCGTC
GATCGCTACG TCGAGTGGCG ATATCGCCGC GGCGCCGGCG TGTTACTGGA TCGACGCGAG
TATCGAGGCC TCATGCCTCA CACAAGGTTG ATCCTCACGC AGAAGGGCGG CCCGTTCGAG
CTGAGCGTGA AGCGCCGGAT GAACTTCGCC GGGGAACCCG TCGAATACTT GGCCGCCGAC
AGCCTGCAGA GTTATGTCAC CAGCTTATAT CGAGCTGCAG GCCTCAGGGC CGGTTACAGC
AGCCACAGCG GTCGACGGAC CTTTGCGAGC CGCCTGGTCG CGCAGGGGCA CTCGCTTGAG
ACGGTGCAGA TTCTCTTGGG GCATTCGCAT CTCGACCATG TGGCCCCGTA TCTTGAAGTC
CCCCGGCGAG ACATGAAAGC TGCGGTTGCT GCGTTTGATG ACGGCCTGTA G
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| Protein sequence | MFRERGSMEP KHAKVLTPPK FRHLLAVTEE TSRFPERDTL ILLLGVTCGM RITEIARLEV
HHVLSRSGTR REEIALPGSI TKGCRPRCVF LSHPRALEAV DRYVEWRYRR GAGVLLDRRE
YRGLMPHTRL ILTQKGGPFE LSVKRRMNFA GEPVEYLAAD SLQSYVTSLY RAAGLRAGYS
SHSGRRTFAS RLVAQGHSLE TVQILLGHSH LDHVAPYLEV PRRDMKAAVA AFDDGL
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