| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6691 |
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| Symbol | |
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| ID | 6181598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 195855 |
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| End bp | 196715 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685439 |
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| Product | virulence protein SciE type |
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| Protein accession | YP_001812344 |
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| Protein GI | 172064694 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA ATACCCCTGA TCCGGCCGCG CAGGCCACCC CCCAGCCGAA GCCGCAAAAC
CTGCTGCGCA CCCAGTCGCT CGATACGCTG AAGGAGCAGA CCGTCGAAAC GGTCCGCCGG
CGTCCGGCCG ACGCGTCGGA ACGCTGGCTG CTGTTTCAGT TGCTGTGCCT CGACGGCGAC
TGGGAGCGCG CGCTCAAGCA GTTGCAGACC TGGGCAACGC TCGAGCCCGA GGGCGAGGCG
CGCGCGCAAC TGCATCGCGG TCTGATCCAG AGCGAGATGT TCCGCACCGG AGTATTCGCC
GGCATCCGTA CGCCCGGCTT CATCGATGAA ACCGTGCCCG CGTGGGTTGA CCAGTTGCTG
CAGGCGAACG CGCGGCTCGG CGCCGGAGAC GTAGCCGGCG CCGACGCGCT GCGCCGGGCC
GCGCTCGACG ACGCGCCGGC GAGCCGCGGA GCAAGCCCCG AGATGGGTGA CTTCGACTGG
CTGAGCGACA GCGACACGCG GCTCGGACCG GTCTGCGAAA TGGCCGTGGC CGGCGGTTAC
CGCTGGATTC CATTCGCCCG GATCAAGTCG CTGACACTAA CGCCAATCGG CACGCTGACC
GACTTCGTTT GGCGGCCGGC CACAATCGTC CTGCGCGACG CCACGGTGCT CCGGGGCTAC
GTGCCGACGC GCTACCCCGG CTCGGAACAC GGTCCCGCCG CGATCCAACT CGCACGCGAA
ACCCGCTGGC AGGATGTCGG CGAAACCAAC GTGATCGCGC TCGGCCAAAA AACCTGGTCG
ACCGACCGGG GCGACTGGGG CCTGTTGGAT ATCGGCGGCT GCCGCTTCAC GAACGAAAGC
GACGATGACG CGGCCCCCTG A
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| Protein sequence | MTANTPDPAA QATPQPKPQN LLRTQSLDTL KEQTVETVRR RPADASERWL LFQLLCLDGD
WERALKQLQT WATLEPEGEA RAQLHRGLIQ SEMFRTGVFA GIRTPGFIDE TVPAWVDQLL
QANARLGAGD VAGADALRRA ALDDAPASRG ASPEMGDFDW LSDSDTRLGP VCEMAVAGGY
RWIPFARIKS LTLTPIGTLT DFVWRPATIV LRDATVLRGY VPTRYPGSEH GPAAIQLARE
TRWQDVGETN VIALGQKTWS TDRGDWGLLD IGGCRFTNES DDDAAP
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