| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6687 |
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| Symbol | |
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| ID | 6181594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 191342 |
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| End bp | 192406 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685435 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001812340 |
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| Protein GI | 172064690 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.895171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA ATACGCCCGG CGCGGTGCTG CGCTACGCGG ATCTCCTCGA ACCTGTTTCG
GACGATGTGC CGTGCGGCCC CGATCTCGAA TACGATCCGG CCTTCGTGAT GCTGCAGGCA
GCCGTCGCGC CCAGAACGGA CGCGCAATAC GGCGATTTCG TCGACGCGCC GCAACCGGCG
AACTGGGCCG AAGCCGAGCG CGCCTGCCGC GCGCTGATGC TACGCACGAA GGACATCCGG
CTGCTTACGA TCCTGATCCG CTGCCGCATC CGCCAAAGCG GCGCCGAAGG TCTGCGCGAC
GGTGTCATTT TATTGCGGCG GATGCTCGAC CGCTACGGCG AGGCATTGCA TCCGACTCCG
GTTATCGACG GCGAGCGCGA TCCGATCGTC TACTCAAACG CGATTGCCGC CCTCGCCGAC
GCCGATGCGA CGCTCGGGGA CGCCCGCGAC ATCCCGCTGC CGAAAACTGC CGGCCTGCAG
TTGCAGTTGC GCGACATCGA GAAAGCGTTC GCCGTCCCGC GCGCCAAGGA TGCGCTCGCG
CCGGAATCGG CGACGCGACT GCTCGGCGAA CTGTGGAATC GGCGCGACCC AACGATCATC
GCGCTGGCGG AGGCGCAGCA TGCCGTCGCC GAAATTTCCG CGCGAACGCG TGACGCTTTG
CAGGCCGACG CACCGGACCT CGACGGCATC ACGAAACTGC TGCAGCCGTT CGCGCAGACG
TCCGCCGAAG CGGGCCGCGC ACCGGCCACC TCCCGTCCGC TCGACGCACC GTCGGATCCG
GCATCGGCGC CGGATGCGGG CGCGGCCTCC GTCCCGCTCG CCGACACGGA AATGCACGAG
GCCGATGCCC CGGCGCTGAC AGCGCCCGCC GGGCGGCCGA CGGATCGCTG GAGCGCGCTC
GCGGCGATTC AGGAGACGCG CCTTTGGTTC GAGCAAAACG AGCCGAGCAG CCCCGTCATC
GTGCTGCTCC GGCAGTCCGA ACGCATGGTT GGCAAGCGCT TTTCCGAGCT TGCGCAGGTG
ATTCCCGCCG AGCTTCTCGC GCAATGGGAC GCGATTGACG TCTAA
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| Protein sequence | MNANTPGAVL RYADLLEPVS DDVPCGPDLE YDPAFVMLQA AVAPRTDAQY GDFVDAPQPA
NWAEAERACR ALMLRTKDIR LLTILIRCRI RQSGAEGLRD GVILLRRMLD RYGEALHPTP
VIDGERDPIV YSNAIAALAD ADATLGDARD IPLPKTAGLQ LQLRDIEKAF AVPRAKDALA
PESATRLLGE LWNRRDPTII ALAEAQHAVA EISARTRDAL QADAPDLDGI TKLLQPFAQT
SAEAGRAPAT SRPLDAPSDP ASAPDAGAAS VPLADTEMHE ADAPALTAPA GRPTDRWSAL
AAIQETRLWF EQNEPSSPVI VLLRQSERMV GKRFSELAQV IPAELLAQWD AIDV
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