| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6678 |
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| Symbol | |
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| ID | 6181567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 174988 |
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| End bp | 176298 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641685426 |
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| Product | hypothetical protein |
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| Protein accession | YP_001812331 |
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| Protein GI | 172064681 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGG GTACGTTCGA TAAAGATGCG TTCGACTTTC TGTCGGGCGA TTCCGGCGCG
TTGCGCGAGC CTCAGAGGGA AGGCAGGGCT GACAGAAGGG GCGCGCCGCG CCCGCTGGCC
GACACAGGCG AGTTTGACGC GACCGAGAAT ATTCAGCAGC GTCTCGACGA GGTGTTCGCC
GCTGAAAATC CGCTGCTTGA GGCGGCGCGG CCGTTGCTCA GAATGCTCGC CGACATGCCG
GCCACGCTCG ACACGTCTGA GGCGGTGGAC GACCTGCGGA CGCTGCTCGT GCTCGAGGTC
AACCTGTTCC AGAAAGTGTG CGATCGGGCC GATCTGCCGT GGAAGCACAT GGCGGTCGTG
CGATATTGCC TTTGTACCGC GCTTGATGAG GCGGCCAATC GCACGAACTG GGGCGGGGGC
GGCGTATGGG CGACGCGGGG TCTGCTGATC ACGTTCGAGG GGGAAGTCGA CGGCGGTGAG
AAGTTCTTCC TGCTGATTGG CCGGATGGCG ACTGATCCAC AGGAGTACGT CGATATCCTC
GAAATCATGT ATCGCGTCCT AGGTCTCGGA TTTGAAGGGC GCTACAGCGT GGTGGCCGAC
GGACGTCGCT ATCTGGAACA AATTCGCCAG CGTCTGTGGA CGCTCATCAC CGGCGCGCGC
GATGCGCTTC AGCCGGAGTT GTCGACGCAC TGGCGAGGCG CGGAGGCCGG CAGGCTGCCC
CTGTTGCGCA GTGTGCCGGT CTGGGCCACG GCCGCCTGTG CGCTGCTCGC GCTGTTTGCG
CTGTTCGTGT TTTACCAGTA CCACCTGCTG TCGGAGCGCC ATGTACTGGA AGCGCGGATT
CTCGATATTG GCAAGGACAG GCTGGTGTCG GCGCCGCAGC GCCTGCGCCT GTCGTACCTG
TTGAGGAACG AGGTCGCCCG CGGCCTGTTG ACTGTGGACG AGGATGACCG GCGCAGCGTC
GTCGTGTTCA AGGGCGATTC GATGTTTGCG TCGGGCCAGA GCACGGTGCT TCCGGTGGTC
GAGCCGGCGT TGGGCAAGGT TGGCGGCGAG GTGGCGCGCG TCGGTGGCAG CGTGCTAGTG
AGAGGGCATA CGGACAATCA GCCGATCCGC AGCGCGGTCT TCCCGAGCAA TCTCGTCCTG
TCGGAAAAGC GCGCAGCGTA TGTCGCGCAG ATTCTTCAGC AGCGTGGTAC GCCCGCGGAT
CGCATTCATG CGATCGGCAA GGGCGATACC CAGCCGGTTG GCGACAACGC CACGGCAGCT
GGCCGGGCAC TTAATCGCCG CGTGGAAATC GTGGTTACGC AGCAACGCTG A
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| Protein sequence | MSSGTFDKDA FDFLSGDSGA LREPQREGRA DRRGAPRPLA DTGEFDATEN IQQRLDEVFA
AENPLLEAAR PLLRMLADMP ATLDTSEAVD DLRTLLVLEV NLFQKVCDRA DLPWKHMAVV
RYCLCTALDE AANRTNWGGG GVWATRGLLI TFEGEVDGGE KFFLLIGRMA TDPQEYVDIL
EIMYRVLGLG FEGRYSVVAD GRRYLEQIRQ RLWTLITGAR DALQPELSTH WRGAEAGRLP
LLRSVPVWAT AACALLALFA LFVFYQYHLL SERHVLEARI LDIGKDRLVS APQRLRLSYL
LRNEVARGLL TVDEDDRRSV VVFKGDSMFA SGQSTVLPVV EPALGKVGGE VARVGGSVLV
RGHTDNQPIR SAVFPSNLVL SEKRAAYVAQ ILQQRGTPAD RIHAIGKGDT QPVGDNATAA
GRALNRRVEI VVTQQR
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