| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6677 |
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| Symbol | |
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| ID | 6181566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 173642 |
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| End bp | 174991 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685425 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001812330 |
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| Protein GI | 172064680 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTGGT TTAACAAGGT CGTGTGGAGC GAAGGTCTTT TCCTGCTTCC CCAGCTGTTT
CAGCAGCAAG AGCGCTATTT TGAACATTTC GCGCACAAGC GCGCGGCGCC GCTGAGCTCG
TTCTTCTGGG GATTCAGCCA GTTCGACATC GATCAGGAGT CGCTTGCGTT CGGCAAGCTT
GTGTTCAAGA GCGGAACCGG CATATTTCCG GACGGCACGC CGTTTGATGT GCCGGCGCAC
GTACCGCCGC CGCCGCCGCT GACGATCGCG CCCGAGCATC AGAACCAGTT GATCTATGTG
GCCGTCCCGC TGCGTCTGCC CAATACGGAG GAGACCGCGT TTCGCGATCA GACGGGTTCG
CTCGCCCGTT ACAGGGCTTT CGAAAATGAG CTTCGGGACA GTAATGCGAT CGGCCAGGGC
CCGAAGCCCG TGCAACTGGC GAACCTGCGC TTGCGGCTTT TGCCCGAGAA AGAGTTGACG
CAGTCGTGGA TCGGCATCGC GCTGACGCGC ATTAAGGCAT TGCGTGTAGA CGGTTCGGTG
TCGCTGCACG ACACTGATCA CATTCCACCG GTCAGCCAAT ATGGCGCCGA TCCGCTGCTG
CGGGAGTGGG CCACTCAGTT GCACGGCCTC GCGAAGCTGC GCGCCGATGC GCTTGCCACT
CGTCTGTCCG GTAGCGACGG GCGTGCTGGG GCGGCGGCGG AAGTGGCCGA TTACCTGTTG
TTGCAGGTAC TGAATCGCTA CGAGCCGCTG CTTGAACATA TTTGCCGGAT TCGCGAGACG
CCGCCCGTGG AGTTCTATCG TGAACTCGCG GTGATGGCCG GCGAACTGTC GACGTTCGTG
CGTCCTCAGA CGCGGCGTCC GTTACCGACG CCGGGCTACG ATCACGCGCA GTTGTTTGGG
AGCATCCGGC CGCTCGTCGA GGAAGTACAT TACCTGCTCA ACCAAGTACT GATACGTGGT
GCACAGCCGA TTCCGCTAAC CGAGCAGCCA CACGGCATCC GCGTCGCTGC TGTGATGCCG
GCCGAACTCT CGGGCTATTC GAGTCTCGTG CTCGCGGTCG GCGCGCAGAT GTCGCCGGAC
GTGCTCCAGC AGCAATTCGC GTCGCAGACG AAGATCAGCC AGCCGCAGCG TCTGCCCGAA
CTGATCCGCT CGCATCTACC GGGCCTCACG GTGGTGCCGT TGCCGGTTCC GCCGCGACAG
ATTCCATTCA ATTCGAGCTA CATCTACTAC GAGCTGTCGC GGAGTGGCCC GTTCTGGGAG
CAGATCGCGC AACAGGGCGG GCTTGCGATG CACATCGCAG GCCACTTCCC GGAACTGAAG
GTCGAACTGT GGGGAGTCCG TCATAAATGA
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| Protein sequence | MSWFNKVVWS EGLFLLPQLF QQQERYFEHF AHKRAAPLSS FFWGFSQFDI DQESLAFGKL
VFKSGTGIFP DGTPFDVPAH VPPPPPLTIA PEHQNQLIYV AVPLRLPNTE ETAFRDQTGS
LARYRAFENE LRDSNAIGQG PKPVQLANLR LRLLPEKELT QSWIGIALTR IKALRVDGSV
SLHDTDHIPP VSQYGADPLL REWATQLHGL AKLRADALAT RLSGSDGRAG AAAEVADYLL
LQVLNRYEPL LEHICRIRET PPVEFYRELA VMAGELSTFV RPQTRRPLPT PGYDHAQLFG
SIRPLVEEVH YLLNQVLIRG AQPIPLTEQP HGIRVAAVMP AELSGYSSLV LAVGAQMSPD
VLQQQFASQT KISQPQRLPE LIRSHLPGLT VVPLPVPPRQ IPFNSSYIYY ELSRSGPFWE
QIAQQGGLAM HIAGHFPELK VELWGVRHK
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