| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6665 |
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| Symbol | |
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| ID | 6181555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 160975 |
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| End bp | 161652 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641685414 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001812319 |
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| Protein GI | 172064669 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0397086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0268041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAT TCGGCGTAGA GGTTATTTTT GCGAATGATA GGCCATTGTC ACTTGCTGGC
ATGGAGTACG TAGCAGGCAA GGCCAATGCG ATCAATCTGG TCGGTGTATG TAGAAGTTCG
GATACATTGA TCGATTCTAT TTCACGCATT CATTGTGACG TCGTGCTGAT CGATTACGCG
ATACGTGGCA ATGGGAAAAG AGAAGGGATG GCGTTACTTG GCTATCTACG GCGTACCTAT
CCGCAGGTCG GAATGGTTGT GTTGGTCACA CACGAGAATC CGGTGATCAT TCAAGCGATC
CTCGATCTGG GCGTGGAAAG CCTCGTCAGC AAGCTCGACG ACGTCGGCCA TATCGTCACT
GCGATTCATG CGTGCTACGG CGGCGGCAGC TATCTTTCGC CGCAGATCAA GCGGTCGCTT
GCATCGTCTG GGGGCGACGG AAGGCGGCCG CCGTTGAGGC TGTCGCCACG CGAAATTGAG
GTGATCCGGC TTTATCTGTC CGGAATGACG ATTAATCAGA TCGCCGGGCG CTTAAATAGA
GGCAAGCCAA CGATCAGCTC GCAGAAGATT AGCGCGATGA AGAAGCTGGG TGTGAAAGGC
GATGTCGAGT TGGTTCGCTA CGCGACTTGT CTCGATCTGA CCGACGAGAG AGGCGCGGAC
CGCTTCGAGA TTCAATGA
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| Protein sequence | MGKFGVEVIF ANDRPLSLAG MEYVAGKANA INLVGVCRSS DTLIDSISRI HCDVVLIDYA
IRGNGKREGM ALLGYLRRTY PQVGMVVLVT HENPVIIQAI LDLGVESLVS KLDDVGHIVT
AIHACYGGGS YLSPQIKRSL ASSGGDGRRP PLRLSPREIE VIRLYLSGMT INQIAGRLNR
GKPTISSQKI SAMKKLGVKG DVELVRYATC LDLTDERGAD RFEIQ
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