Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6520 |
Symbol | |
ID | 6181766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | - |
Start bp | 17125 |
End bp | 17586 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641685289 |
Product | putative outer membrane lipoprotein transmembrane |
Protein accession | YP_001812194 |
Protein GI | 172064544 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGA TCTTCATCTC TATCGTGGTT CTGTCCTGCC TGAGCGCGTG CGCGTCGGTC GACTTCGGTT CGCCGGACGT CTACCAGCGC TACGACGTAC AGCACGCAGG AACGATCGAG GCGGCCACGG TCGTCAGCGT TCGCACCATC ACGATCGACA GCGGGTCCGA TAACTCAGGC CTGTCGTCGC TGCTCAGTGC AGGCGTGAGT GCTTTTCTTG GCTCCCGCAC GATCGGCGGC GGCAATGGCC GCTATATCGC CGGTGCAATC GCCGGAGCGG GTGCCGGGTT CATTACCCAG AAGGTATCGG CGGTCCTGCA GCGTCACGCA GGCGTCGAGG TCGTAGTGCG CGCGGCGTCC GGCCGGACGC TGGTGATCGT TCAATCCAAC GAGCAGCGCT TCGCCCCCGG CGATCGCGTG ATGCTCGTCA GCAGTTCTTC CGGCATGCGT ATCACGCGCT GA
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Protein sequence | MFKIFISIVV LSCLSACASV DFGSPDVYQR YDVQHAGTIE AATVVSVRTI TIDSGSDNSG LSSLLSAGVS AFLGSRTIGG GNGRYIAGAI AGAGAGFITQ KVSAVLQRHA GVEVVVRAAS GRTLVIVQSN EQRFAPGDRV MLVSSSSGMR ITR
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