| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5488 |
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| Symbol | |
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| ID | 6180440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2736569 |
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| End bp | 2737528 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685243 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001812148 |
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| Protein GI | 172064497 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.80176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000205378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCCGTC CGATCACGTC CACCCCGCCC GCCGGCGCCG GCGCCAACGC TACGCCGCCG
CCGCGCGGCG CATCCGCCGC CGCCGGGTTG CGCGCGCGCC GCCCGTCGCC CGCCGCGCGG
CGGCAACAGC GCGCCGCGTG GCTCTTTCTC GCGCCCGCGT GCGCGATGGT TGCCGTCTAT
GTGATCTGGC CGATCCTGTC GACGCTGTGG CTGAGCCTCT GCAACTGGGA CGGCATGACC
GAGCGCACGT TCGTCGGTCT CGCGAACTAC GTCGAGCTGC TGCATGCGCC GACCTTCTAC
ACCGCGCTGC GCAACAACGT GATCTGGCTT GCGCTGTTCA TGCTCGCGCC GCCGCTCGGC
CTCGCGCTCG CGCTGTACCT GAACCAGGCG GTGGCCGGCA TCCGGCTCGT GAAGTCGCTG
TTCTTCGCGC CGTTCGTGCT GTCGGGCGTG GTGGTCGGCC TGATTTTCTC GTGGTTCTAC
GATCCGACCT TCGGGCTGCT CGCGCTGATC GCCGGACACG GGATCCCGGT GCTCGGCGAT
GCGCGCTATG CGACGTTCGG CATCGTGTTC GCCGCGCTGT GGCCGCAAAC CGCGTACTGC
ATGATCCTGT ACCTGACCGG CCTCACGTCG GTCAACCCTG AGCAGATCGA AGCGGCGCGG
ATGGAAGGCG CGCGCGGCTT CGCGCTGCTG TGGCACGTCG TGCTGCCGCA GTTGCGCCCG
ACCACGTTCA TGGCGATCGT CGTCACGGTG ATCGGCGCGC TGCGCAGCTT CGACCTGATT
TCGGTGATGA CGGGCGGCGG CCCGTTCGAG AGCTCGACCG TGCTCGCGTA TTACATGTAC
GACCAGGCGA TCAAGTACTA CCGGCTCGGC TATTCCGCGT CGATCGCGGT CGTGCTGTTC
GCGATCATGC TCGTCTACAT CGTGTTCCAG TTGCGCCGCA TGCTGCGCAA CGAGCAGTGA
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| Protein sequence | MSRPITSTPP AGAGANATPP PRGASAAAGL RARRPSPAAR RQQRAAWLFL APACAMVAVY
VIWPILSTLW LSLCNWDGMT ERTFVGLANY VELLHAPTFY TALRNNVIWL ALFMLAPPLG
LALALYLNQA VAGIRLVKSL FFAPFVLSGV VVGLIFSWFY DPTFGLLALI AGHGIPVLGD
ARYATFGIVF AALWPQTAYC MILYLTGLTS VNPEQIEAAR MEGARGFALL WHVVLPQLRP
TTFMAIVVTV IGALRSFDLI SVMTGGGPFE SSTVLAYYMY DQAIKYYRLG YSASIAVVLF
AIMLVYIVFQ LRRMLRNEQ
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