| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5483 |
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| Symbol | |
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| ID | 6180922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2728573 |
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| End bp | 2730678 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685238 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001812143 |
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| Protein GI | 172064492 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00706275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGGA AGAACTGGGC GGCCGCACCG ATGGCCATCG TCGTCGGCAC GGCCGGCCTG
AGCGCCGCCG AGGCTCAGGA ACTGTCGCTG CCTGCGATCG AAGTCTCCGG GCAGCGCACG
ACGGCGCCGT TTCGCGCGCC GGAATCGACG AGCGCGACGC GCACCGAGAC GGACGTGATG
GAGATTCCGT TCGCGGTCAG CAGCGTCGAC AAGAAACTGA TCCAGACCGT CGCCGCCACA
CGCGGCGAAG ACCTGTACGA CTGGGTCGCC GGCGTCGCGC GGCAAAACAA CTTCGGCGGG
CTGTGGGACA ACTACGCGGT GCGCGGCTTC GCCGGCGACG GCAACACGTC CGGCACCGAC
TACCTCGTCA ACGGCTTCTC GTGGAATCGC GGCATAAGCG TGCCGCGCGA CACCGCCACG
CTCGAGCGCA TGGAAGTCCT CAAGGGGCCC GCGTCCGCGC TGTACGGCCG CGGCGATCCC
GGCGGGCTCA TCAGCTACAC CACCAAGCAG CCGCAGTTCG CGCGCGCGAA CACGATCGGC
GTGTCGGCCG GCAGCTACGG CGCGCTGCGG GAGACGCTCG ATTCGACCGG CCCCGTCACG
AAGTCGCTCG CGTACCGCTT CATCGCGATG AACGAGGACA ACGGCAGCTT CCGCGATACC
GTGTCGAGCA AGCGCTACCT GTTCGCGCCG TCGTTCACGT GGGACATCGG CGCGGATACG
ACGCTCCACT ACGAATTCGA GACCGCCCGC CAGCGCGCGC CGCTCGATCG CGGTGTGGTC
GCGGTCAACG GGCAGCTCGG TGCGGTGCCG GCGTCGAGGT TCATGGGCGA GCCGCGCGAC
GGCGACTACG ACGTGCGCAA CTCGGGCCAC CAGTTCACGC TCGAACATCG CTTCAATGCC
GACTGGTCGG TCAACGCCGG CTTCGCGCAG CGCGACACCG ACCTGTCCGG CCGCTCGTCC
GAAGCGTTCG CGCTGCAGCC GGACGGGCGT ACGCTGTGGC GCCGCTACCG GCAGGTCGCG
TTTCACTCGA ACGACGTGCA AGGGCGCGTC GAGGTGGCCG GCAAGGCCCG CACGGCCGGC
ATCGGGCACA CGTTCGTGAT GGGCGCCGAC GCGTATCGCT TCAACTACGA CCAGTTCGTG
TCGCGCTCGA CGCCGACGGC CGCGGCGCCG TATGCGATCG ACATCTTCGA TCCGGTCTAC
GGCCAGCCGG CGCCCGTGCC GCGCACCGCG ACGAACCTGC TCGAGCGCGA CGACGGCCAG
GGCCTGTACG CACAGGACAC GCTCGCGTTC GGGCCGCACT GGAAAGTGCT CGCCGGGCTG
CGCTGGGACC GTTTTCACCA GTCGGTCGAG AATCGCCTGA AGGGCGCGAC GACGACCCAG
CTGCAAACGG CGCTGAGCCC GCGGCTCGGC ATCGTGTACG AGGCCAGCTC CGCGCTGTCG
CTCTACGCGA ACACCGCGTA TTCGTTCCGG CCGAACAACG GCGCCGACGT GAACGGCCGC
GCGTTCGATC CGGAGAAGGG GCGCGGCTAT GAGGCCGGCG TGAAATGGGC CGGCACGCGC
TGGCTCGCGA CCGTCGCCGC GTTCTACGTG AACAAGCGCA ACGTGCTGAC CGCCGATCCG
GCGAACGCCG GGTTCTCGCG TGCGGCCGGC GAAGTACGCA GCCGCGGCGT CGAATTCGAA
TGGAACGGCG AACTCGGCCA CGGGTTGCGC GGCATCGTCA ACCTCGCGTA CGTCGATGCG
CAGGTCACGC ACGACAGCGT GCTGACGCCG GGTGCACGCC TCGTCGACAT TCCGCGGCTG
AGCGGGAGCG CGCTGCTGAT GTACGAAACC GCGCTGCCGC TCGTCGACAA GGCCGGCGCG
GGCGCGGGCG TGATCTACGT CGGGCGCCGC GCGGGCAACA CAGCGAACAC GCAGGACGGC
TTCGACCTGC CCGCTTACGC GACCGTGCAG CTCAACGGCT ACGTGCAAGT CAACAAGCAT
CTGCGCGCGT CGGTCGTGCT GAACAACCTG TTCAATCGCA CGTACTACGT CAGCTCGTAC
AACAGCCTGT GGGTCACGCC GGGCGCGCCG CGCGGCCTGT TCGCGTCGCT CGCGTATTCG
TTCTAG
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| Protein sequence | MSRKNWAAAP MAIVVGTAGL SAAEAQELSL PAIEVSGQRT TAPFRAPEST SATRTETDVM
EIPFAVSSVD KKLIQTVAAT RGEDLYDWVA GVARQNNFGG LWDNYAVRGF AGDGNTSGTD
YLVNGFSWNR GISVPRDTAT LERMEVLKGP ASALYGRGDP GGLISYTTKQ PQFARANTIG
VSAGSYGALR ETLDSTGPVT KSLAYRFIAM NEDNGSFRDT VSSKRYLFAP SFTWDIGADT
TLHYEFETAR QRAPLDRGVV AVNGQLGAVP ASRFMGEPRD GDYDVRNSGH QFTLEHRFNA
DWSVNAGFAQ RDTDLSGRSS EAFALQPDGR TLWRRYRQVA FHSNDVQGRV EVAGKARTAG
IGHTFVMGAD AYRFNYDQFV SRSTPTAAAP YAIDIFDPVY GQPAPVPRTA TNLLERDDGQ
GLYAQDTLAF GPHWKVLAGL RWDRFHQSVE NRLKGATTTQ LQTALSPRLG IVYEASSALS
LYANTAYSFR PNNGADVNGR AFDPEKGRGY EAGVKWAGTR WLATVAAFYV NKRNVLTADP
ANAGFSRAAG EVRSRGVEFE WNGELGHGLR GIVNLAYVDA QVTHDSVLTP GARLVDIPRL
SGSALLMYET ALPLVDKAGA GAGVIYVGRR AGNTANTQDG FDLPAYATVQ LNGYVQVNKH
LRASVVLNNL FNRTYYVSSY NSLWVTPGAP RGLFASLAYS F
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