| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5473 |
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| Symbol | |
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| ID | 6181367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2716699 |
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| End bp | 2717598 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685228 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001812133 |
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| Protein GI | 172064482 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0410042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGA TTCATCCGGG CGCGGCAGCG CTGCTGGTCG ACAGCCGCAA CGCGCTCGGC
GAAGGCGCGA CGTGGTGCGA CGCGACGCGC TCGCTGTACT GGACGGACAT CGAAGGCGCG
CGGCTGTGGC GTTGCCGCGC GGACGGCTCG GGCCTCGCGC ACTGGCCAAT GCCCGAGCGG
CTCGCGTGCT TCGCGCTGAC GAACGCGCCG GACGTGCTGC TCGTCGGGCT CGCGACGCAT
CTCGCGTTCT TCGAGCTGCG TAGCGGGGCG TTCACGCGGA TCGTCGACGT CGAACCCGAA
TTGCCGACGC GCCTGAACGA CGGGCGCTGC GATCCGTCCG GCGCGTTCGT GTTCGGGATG
AAGGACGAGG GCGGTGACCC GCCGCGCGCG GTCGGCGGGT TTTACCGGCT CAATGCAGAC
CTCACGCTCG AACGGCTCGC GTTGCCGGCG GCCGCGATCG CGAACAGCAT CGCGTTCTCG
CCGGACGGCT CGAAGATGAC GTTCTGCGAT TCGATGGTGC GCGAGATCCT CGTGTGCGAT
TACCGCGCGG ACGGCGATGT CGCGAACGTG CGGCCGTTCG CGCGGCTGAC CGATGCGGAC
GGCGACCCGG ACGGCTCGAC GATGGATCGC GACGGCGGCC TGTGGAACGC GCAGTGGGGC
GGCCGGCGGG TCGTGCGCTA CGGGCCGGAC GGCGTCGAGA CGGACCGCGT GGCGGTGCCG
ACCGCGCAGC CGAGCTGCGT GGCGCTTGAT GGCGAAGGTC GGCTGTACGT GACGAGTGCG
CGTGTTGGGC TGAGTGACGA CGCGCTGGCG AGCGATGCCG ATGCCGGCGG CGTGTTCGTC
GCGCAGACGC GTCATGCGGG GCTGCCGACG GCGCGGTTTG CGGGGATGCC CGCGAGGTGA
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| Protein sequence | MQQIHPGAAA LLVDSRNALG EGATWCDATR SLYWTDIEGA RLWRCRADGS GLAHWPMPER
LACFALTNAP DVLLVGLATH LAFFELRSGA FTRIVDVEPE LPTRLNDGRC DPSGAFVFGM
KDEGGDPPRA VGGFYRLNAD LTLERLALPA AAIANSIAFS PDGSKMTFCD SMVREILVCD
YRADGDVANV RPFARLTDAD GDPDGSTMDR DGGLWNAQWG GRRVVRYGPD GVETDRVAVP
TAQPSCVALD GEGRLYVTSA RVGLSDDALA SDADAGGVFV AQTRHAGLPT ARFAGMPAR
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