Gene BamMC406_5466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5466 
Symbol 
ID6180001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2709555 
End bp2710058 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID641685221 
ProductMarR family transcriptional regulator 
Protein accessionYP_001812126 
Protein GI172064475 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.17419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG CACCGACCAA GCCCGCGTCC CCGAAGAACA CCGCGAAGAA CGCCGCCCGC 
GCGGCGGGCG ACAAGCCGAA GGCGCGCGCG CCGCAGCGCC TGACCTACGT GATCGGCGGT
CTCGACCGGC TGCTGCGCCG GCATATGACC GACGCGCTCG CACCGCTCGG CATCACGCTC
GCGCAATACA CGGCGCTGTC GGTGCTGGAG GCGCGCGGCG CGTCGTCGAA TGCGCAACTG
GCCGAACGCT CATGGATCAC GCCGCAATCG GCGAACGAGG TGATGAGCGT GATGGCCGCC
CGCGGTTTCG TCACACGCGA GGCCGACCCG TCGCACGGCC GCATCATCCT GCTGACGCTG
ACCGACGCAG GCGCGGCGAT GCTGCGTGAA TGCGAAGCCG TGCTGCGCCC GCTCGAGACG
CGCATGCTCG GCGACATCTC CGCTGACGAC GCCGCGCACG TGCAGCGCGC GCTCGAACTG
TTCTCGCGCA ACCTGCGCGG CTGA
 
Protein sequence
MSSAPTKPAS PKNTAKNAAR AAGDKPKARA PQRLTYVIGG LDRLLRRHMT DALAPLGITL 
AQYTALSVLE ARGASSNAQL AERSWITPQS ANEVMSVMAA RGFVTREADP SHGRIILLTL
TDAGAAMLRE CEAVLRPLET RMLGDISADD AAHVQRALEL FSRNLRG