Gene BamMC406_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5439 
Symbol 
ID6179913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2678988 
End bp2679698 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID641685194 
Producthypothetical protein 
Protein accessionYP_001812099 
Protein GI172064448 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.118943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CGCCGGATAT GCCCACGCCA CGCGCCCTGC GCGAACTCAC GCCCCTCGAG 
GCCCGCATTC TCGGGGTGCT CGTCGAGAAG CAGCACACGG TGCCGGACAC CTATCCGCTG
TCGCTGAACG CGCTGACCGC GGGCTGCAAC CAGAAAACCG CACGCTCGCC AGTGATGAAC
GTCAGCGAGG ACGAGGTCAC GACCGCGCTC GACAGCCTCA AGCACCTGAG CCTCGTGATG
GAGGGCAGCA GCAGCCGCGT GCCGCGTTTC GAGCACAACA TGAATCGCGT GCTCGGCATC
CCGAGCCAGG CGATCGCGCT GCTGACGATC CTGCTGCTGC GCGGCCCGCA GACGGCGGCC
GAACTGCGCC TGAACAGCGC GCGCCTGCAC GGCTTCGCGG ACATCTCGTC GGTCGAGGCC
TTCCTCGACG AGCTCGCCGC GCGTGCGCAA CCGCTCGTGA TCCGGCTGCC GCGTGCGCCC
GGTGCGCGCG AGAACCGCTG GATGCACCTG ATGTGCGGCG AGGTGAACGT CGCCGACTTC
GCCGGTCCGG ACACCGGTGG CGGCACGGAT TCCGTTCCGC CGTCCGAGTT CGAGGCGCTG
AAGGCCGAGC AGAAGCGGCT TGCGGATGAA GTGGCGCGGC TGAACGCGCT CGTTCAGCGG
ATGGCGACCG AACTCGGGAT CGACGTCGAC GCGCCGGGCG ACGTGAGCTG A
 
Protein sequence
MNTTPDMPTP RALRELTPLE ARILGVLVEK QHTVPDTYPL SLNALTAGCN QKTARSPVMN 
VSEDEVTTAL DSLKHLSLVM EGSSSRVPRF EHNMNRVLGI PSQAIALLTI LLLRGPQTAA
ELRLNSARLH GFADISSVEA FLDELAARAQ PLVIRLPRAP GARENRWMHL MCGEVNVADF
AGPDTGGGTD SVPPSEFEAL KAEQKRLADE VARLNALVQR MATELGIDVD APGDVS