Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5439 |
Symbol | |
ID | 6179913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2678988 |
End bp | 2679698 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641685194 |
Product | hypothetical protein |
Protein accession | YP_001812099 |
Protein GI | 172064448 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.118943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA CGCCGGATAT GCCCACGCCA CGCGCCCTGC GCGAACTCAC GCCCCTCGAG GCCCGCATTC TCGGGGTGCT CGTCGAGAAG CAGCACACGG TGCCGGACAC CTATCCGCTG TCGCTGAACG CGCTGACCGC GGGCTGCAAC CAGAAAACCG CACGCTCGCC AGTGATGAAC GTCAGCGAGG ACGAGGTCAC GACCGCGCTC GACAGCCTCA AGCACCTGAG CCTCGTGATG GAGGGCAGCA GCAGCCGCGT GCCGCGTTTC GAGCACAACA TGAATCGCGT GCTCGGCATC CCGAGCCAGG CGATCGCGCT GCTGACGATC CTGCTGCTGC GCGGCCCGCA GACGGCGGCC GAACTGCGCC TGAACAGCGC GCGCCTGCAC GGCTTCGCGG ACATCTCGTC GGTCGAGGCC TTCCTCGACG AGCTCGCCGC GCGTGCGCAA CCGCTCGTGA TCCGGCTGCC GCGTGCGCCC GGTGCGCGCG AGAACCGCTG GATGCACCTG ATGTGCGGCG AGGTGAACGT CGCCGACTTC GCCGGTCCGG ACACCGGTGG CGGCACGGAT TCCGTTCCGC CGTCCGAGTT CGAGGCGCTG AAGGCCGAGC AGAAGCGGCT TGCGGATGAA GTGGCGCGGC TGAACGCGCT CGTTCAGCGG ATGGCGACCG AACTCGGGAT CGACGTCGAC GCGCCGGGCG ACGTGAGCTG A
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Protein sequence | MNTTPDMPTP RALRELTPLE ARILGVLVEK QHTVPDTYPL SLNALTAGCN QKTARSPVMN VSEDEVTTAL DSLKHLSLVM EGSSSRVPRF EHNMNRVLGI PSQAIALLTI LLLRGPQTAA ELRLNSARLH GFADISSVEA FLDELAARAQ PLVIRLPRAP GARENRWMHL MCGEVNVADF AGPDTGGGTD SVPPSEFEAL KAEQKRLADE VARLNALVQR MATELGIDVD APGDVS
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