| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5424 |
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| Symbol | |
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| ID | 6180160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2668003 |
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| End bp | 2669163 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685179 |
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| Product | hopanoid biosynthesis associated radical SAM protein HpnH |
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| Protein accession | YP_001812084 |
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| Protein GI | 172064433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.795895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATTC CGCTGCTCCA GCAAGTCCGC GTCGGCGCAT ACATCATGCG CCAACACCTG
TCCGGCAACA AACGCTATCC GCTCGCGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC
GCGTGCAACG GCTGCGGCAA GATCGACTAT CCGGACCCGA TCCTGAACCA GCGCCTGTCC
GTCGAGGAAT GCCTGGGAGC CGTCGACGAG TGCGGCGCGC CCATCGTGTC GATCGCCGGC
GGCGAGCCGC TGCTCCACAA GGAGATGCCG GAGATCGTCA AGGGCATCAT GAAGCGCAAG
AAATTCGTGT ACCTGTGCAC GAACGCGCTC CTGATGGAAA AGAAGATGGA CGACTACGAG
CCGAATCCGT ACTTCGTCTG GTCGGTCCAC CTCGACGGCG ACAAGGAGAT GCACGATCAC
TCCGTATCGC AGGAAGGCGT GTACGACAAG GCGGTCGCGG CCATCAAGGA AGCGAAGCGC
CGCGGCTTCC GCGTGAACAT CAACTGCACG CTGTTCAACG ATGCGATCCC CGAGCGCGTC
GCGAAGTTCT TCGACACGCT GGGGCCGATC GGCGTCGACG GCATCACCGT GTCGCCGGGC
TACGCATACG AACGCGCGCC GGATCAGCAG CACTTCCTGA ACCGCGACAA GACGAAGAAC
CTGTTCCGCG AGATCCTGAA GCGCGGCGAA GGCGGCAAGC GCTGGTCGTT CAGCCAGTCG
TCGCTGTTCC TCGACTTCCT GGCCGGCAAC CAGACGTACA AGTGCACGCC GTGGGGCAAC
CCCGCACGCA CCGTGTTCGG CTGGCAGAAG CCGTGCTATC TGGTCGGCGA AGGTTACGTG
AAGACCTTCA AGGAACTGAT GGAAGACACG AACTGGGACA ACTACGGCGT CGGCAACTAC
GAGAAGTGCG CGGACTGCAT GGTCCACTGC GGCTTCGAAG CCACGGCCGT GATGGACACG
ATCTCGCATC CGCTGAAGGC GCTGCGCGTG AGCAAGAAGG GCATCAAGAC GGACGGCCCG
TTCGCACCGG ACATCTCGAT CGCGAAGCAG CGTCCGGCCG AGTATGTGTT CTCGCGCCAC
GTCGAGATCA AGCTCGACGA AATCCAGCGC GCCGGCAAGG GCAAGCTGCA GAAGCCGGCG
AAGCCGGCAA CGGCGGCTTA A
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| Protein sequence | MSIPLLQQVR VGAYIMRQHL SGNKRYPLAL MLEPLFRCNL ACNGCGKIDY PDPILNQRLS
VEECLGAVDE CGAPIVSIAG GEPLLHKEMP EIVKGIMKRK KFVYLCTNAL LMEKKMDDYE
PNPYFVWSVH LDGDKEMHDH SVSQEGVYDK AVAAIKEAKR RGFRVNINCT LFNDAIPERV
AKFFDTLGPI GVDGITVSPG YAYERAPDQQ HFLNRDKTKN LFREILKRGE GGKRWSFSQS
SLFLDFLAGN QTYKCTPWGN PARTVFGWQK PCYLVGEGYV KTFKELMEDT NWDNYGVGNY
EKCADCMVHC GFEATAVMDT ISHPLKALRV SKKGIKTDGP FAPDISIAKQ RPAEYVFSRH
VEIKLDEIQR AGKGKLQKPA KPATAA
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