| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5415 |
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| Symbol | |
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| ID | 6180902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2657952 |
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| End bp | 2659472 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641685170 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001812075 |
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| Protein GI | 172064424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAC CTGTTTCACA AACCCGATCG TTTACGACGG TCTTCCTCAT CGAAATGTGG
GAGCGCTTCG GCTACTACGG CATGGCCGCG CTTCTGGTCC TCTTCATGGT CGACCGGCTC
GGTTTCACCG ACAGCCATGC GAACCTGACC TGGGGCGCGT TTACCGCGCT CGTCTACGCG
TCGCCGTCGA TCGGCGGCTG GATCGGCGAC AAGGTGCTCG GCGCCCGTCG CACGATGATC
ATCGGCGCGG CCGTGCTGTG CGCGGGCTAC CTGATGCTGG CGGTTCCGAA CGACGCGCTG
GCGTACATGT ACGCATCGCT CGGCGTGATC GTCGTCGGCA ACGGCCTGTT CAAGGCCAAC
GCGGCGAACC TCGTGCGCCG GATCTACGAA GGCGACGACG CGCGCATCGA CAGCGCGTTC
ACGATCTACT ACATGGCGGT CAACATCGGC TCGACCGTGT CGATGCTCGC GACGCCGTGG
ATCAAGGATC ACTGGGGCTG GCACACCGCG TTCGCGGTCT GCTGCGGCGG CATGCTGCTC
GCGATCCTGA ACTTCATGCT GATGCACCGC ACGCTCGCGC ACATCGGCTC GCAGCCCGAC
GACGAACCGA TCCGCTGGAA GCGCCTCGGC GGCGTTGCGG CAGGCGGCGT CGCGCTCGCG
CTGATCACGC TGTACGTGCT GCAGCACAAG CAGCTCGCGG TCGCGAGCGT GTGGACGGCC
GCGTTCGCGA TCCTGGCGAT CTTCGCGTAC ATGATCGCGA AGTCGGAGCG TTCGGAGCGC
GCGGGCCTGA TCGCGGCGCT GGTGCTGATC GGCCAGGTGA TCCTGTTCTT CATCTTCTAC
GTGCAGATGT CGACGTCGCT GACGCTGTTC GCGCTGCGCA ACGTGGATCC GCGCTTCATC
CTGTTCGGCA CGACGCTGTT CACGTGGAGC GCCGCGCAGT TCCAGGCACT GAACCCGATC
TGGATCATGA TGCTGAGCCC GCTGCTCGTG TGGATCTACA ACGCGTTCTC GAAGAGCGGC
CGTGACCTGC CGGTCGCGGC GAAATACGCA TTCGGCTTCG GCGCGGTGGC GGCCGGCTAC
CTGGTGTTCA CGATCAGCGG CCGCTACGCG GTGGACGGTC GCGTGTCGTC GTGGTTCATG
GTGTGGGGCT ACGGCCTCTA CTCGCTCGGC GAACTGCTGG TGAGCGGCCT CGGCCTCGCG
ATGATCGCCC GCTACGTGCC GGCGCGCATG AGCGGCTTCA TGATGGGCGC GTATTTCGTC
GCGACGGGTG TGTCGCAGTA TCTGGGCAGC GTCGTCGCGA ACTTCGCGCA GATGCCGTCG
CACGACCTGC CGGCCACCGA ATCGCTGCCG CTCTATCTTT CGCTGTTCGA AAAGCTCGGC
TGGCTCGCCG CGATCGGCAT GCTGCTGGCG CTGCTGCTGC TGCCGATGAT GAACCGCCTG
TCGCGCCAGC ATCAGCGCTG CACGGACGAG CGCCGCGAGG AAGAAGCGGT GCAGGCGCAG
GCGATGGCCT CGGCTCAGTA A
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| Protein sequence | MHAPVSQTRS FTTVFLIEMW ERFGYYGMAA LLVLFMVDRL GFTDSHANLT WGAFTALVYA
SPSIGGWIGD KVLGARRTMI IGAAVLCAGY LMLAVPNDAL AYMYASLGVI VVGNGLFKAN
AANLVRRIYE GDDARIDSAF TIYYMAVNIG STVSMLATPW IKDHWGWHTA FAVCCGGMLL
AILNFMLMHR TLAHIGSQPD DEPIRWKRLG GVAAGGVALA LITLYVLQHK QLAVASVWTA
AFAILAIFAY MIAKSERSER AGLIAALVLI GQVILFFIFY VQMSTSLTLF ALRNVDPRFI
LFGTTLFTWS AAQFQALNPI WIMMLSPLLV WIYNAFSKSG RDLPVAAKYA FGFGAVAAGY
LVFTISGRYA VDGRVSSWFM VWGYGLYSLG ELLVSGLGLA MIARYVPARM SGFMMGAYFV
ATGVSQYLGS VVANFAQMPS HDLPATESLP LYLSLFEKLG WLAAIGMLLA LLLLPMMNRL
SRQHQRCTDE RREEEAVQAQ AMASAQ
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