| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5322 |
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| Symbol | |
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| ID | 6181507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2543063 |
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| End bp | 2545207 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685077 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001811982 |
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| Protein GI | 172064331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC ACACCGCCAA CCCTCCGCCG CCACCGGCGC CGCCTCCCGC ATCGCCGCGC
AGCCGTGCAT GGCGCATCCT CGCCGGCGCG CTGCTCGGCC TGACGCTCGC GTGCGCGGGC
ATCGGCGCAT GGACGATCCA CCGCATCTGG ACGCAACTGC CGTCCGTCGA ACATCTGGCC
GACTACCGTC CCGCGCTGCC GCTGCGGATT TTCTCGCGTG ACGGCGAGCT GCTGGCCGAA
TACGGCGTCG AGCGCCGCGA GTTCGTGCCG CTCGAACGCA TTCCGCCGCT GATGCGCCAC
GCGCTGCTCG CGGCCGAGGA CGCGAAGTTC TACCAGCACG GCGCGATCGA TGTCGGCGGC
CTCGCGCGCG CGACGTTCGC GAACCTCGTG ACGGGGCAGC CGGGGCAGGG CGGCAGCACG
ATCACGATGC AGGTCGCGCG CAACTTCTAC CTGACGCGCG ACAAGGTGCT GAGCCGCAAG
CTCGCCGAGA TCCTGATGGC GATCAAGCTC GAGCGCGAAT ACGGCAAGGA CAAGCTGCTC
GAGCTGTACA TGAACCAGAT CTATCTCGGC GAGCGCGCGT ACGGTTTCGC GGCGGCCGCG
AACGTCTATT TCGGCAAGCC GCTCGACGCG CTGAGCGCGG GCGAGGCGGC CGTGCTCGCC
GGGCTGCCTA AGGCACCGTC CGCGTTCAAC CCGGTCGTCA ATCCGGCACG CGCGACCGCG
CGGCGCAACT ACGTGCTCGG CCGCATGCAT GCGCTAGGCG AGCTCGACGA TGCGGCGTAT
CGCGCGGCCG TCGACGCGCC GATCGCGCTC GCGACCACGC CGCCGCCCGG CATCATCGCG
GCGCCGTACG TCGCGGAGCG CGCGCGCCGG ATGATGGTCG AGCGATTCCA TGACGACGCC
TACACGCTGG GCCTCGACGT GACGACGACG ATCACGATGC GCGACCAGCG CGCGGCCGAA
GCCGCGCTCG ACCGCACGCT GAGCCGGCAG CCACGCGCGA AGCGCGATGC GCGCAACGGG
CTCGAAGGCG CGCTCGTATC GCTGGATGCG GCGACCGGCG ACATGCTGGC GCTCGTCGGT
GGCGCGGATT TCAACGCCAA CGTGTTCGAC CACGCATTGC AGGCGTATCG GCAGCCGGGG
TCGAGCTTCA AGCCATTCGT CTATTCGGCG GCGCTAGAGA AGGGCTATTT CCCGGGCGTG
CTGGTCGACG ATACGCAGCG CACGCTCACC CATTTGGAAA CCGGCGCACG GCCGTGGCGT
CCGCGCAATT ACGGCAACCG CTACGAGGGC TTCATCCCGG TGCGGCGCGG GCTCGTGCGC
TCGAAGAACC TCGTCGCGGT CAGCCTGATG CAGGCCGCCG ACGCGCGCTA CGTGCAGCAG
CACGCGGTGG GCTTCGGTTT CGACGCGCAG CGCAATCCGG CGTCGCTGCC GCTCGCGCTC
GGCGCGGGCG CCGTGACGCC GCTCGAACTC GCGAGCGCGT ACGGCGTGTT CGCGAACGGC
GGGAGGCGGA TGCTGCCGCG GCTGATCCTG TCGGTGAAGC AGCGTCACGG CGGCGCGCTG
TACGACGCGC CGGCGCCGGA CGGCTCGCGC GTCGTGTCGG CGCGCAATGC GTTCGTGATG
GACAGCATGT TGCGCGACGT CGTGCGGGCC GGCACCGCGC GCGGCGCGCT CGCGCTGCGC
CGCGACGACG CGGCCGGCAA GACCGGCACG TCGAACGGCT CGAAGGACGT GTGGTTCGCG
GGCTATTCGT CGGGCATCGT CGCGGTCGCG TGGCTCGGCT ACGACACGCC GCGGACGATG
GGTCGCGCGA CCGGCGCGAC GCTCGCGCTG CCGGTCTGGC TCGACTACAT GAAGACGGCC
GTCGCCGGAC GTACGCCGGT CGACGCAACG CCGCCGCAGG ACCTCGCGCT CGTCGACGGC
GATTTCGTGT ACACCGAATA CACGCGCGGC ACCTGCACCG CCGACGTGCC GCCGTACATT
CGCAGCCGCT TCGCGTGCGG CGGCGCGCCG GCGTCCGATG CGCCGGACGC GCCGGACGCG
CCGGACGCGC CGGACGCGCA CAACAAGCGC GACGAGCCGA TGCCCGCGAC CGTCGATGCG
GCCGAGCGCG AACGCGTGCT CGACCTGTTC CGTACCGAGG ACTGA
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| Protein sequence | MTDHTANPPP PPAPPPASPR SRAWRILAGA LLGLTLACAG IGAWTIHRIW TQLPSVEHLA
DYRPALPLRI FSRDGELLAE YGVERREFVP LERIPPLMRH ALLAAEDAKF YQHGAIDVGG
LARATFANLV TGQPGQGGST ITMQVARNFY LTRDKVLSRK LAEILMAIKL EREYGKDKLL
ELYMNQIYLG ERAYGFAAAA NVYFGKPLDA LSAGEAAVLA GLPKAPSAFN PVVNPARATA
RRNYVLGRMH ALGELDDAAY RAAVDAPIAL ATTPPPGIIA APYVAERARR MMVERFHDDA
YTLGLDVTTT ITMRDQRAAE AALDRTLSRQ PRAKRDARNG LEGALVSLDA ATGDMLALVG
GADFNANVFD HALQAYRQPG SSFKPFVYSA ALEKGYFPGV LVDDTQRTLT HLETGARPWR
PRNYGNRYEG FIPVRRGLVR SKNLVAVSLM QAADARYVQQ HAVGFGFDAQ RNPASLPLAL
GAGAVTPLEL ASAYGVFANG GRRMLPRLIL SVKQRHGGAL YDAPAPDGSR VVSARNAFVM
DSMLRDVVRA GTARGALALR RDDAAGKTGT SNGSKDVWFA GYSSGIVAVA WLGYDTPRTM
GRATGATLAL PVWLDYMKTA VAGRTPVDAT PPQDLALVDG DFVYTEYTRG TCTADVPPYI
RSRFACGGAP ASDAPDAPDA PDAPDAHNKR DEPMPATVDA AERERVLDLF RTED
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