| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5315 |
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| Symbol | |
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| ID | 6179451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2535618 |
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| End bp | 2537921 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641685070 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001811975 |
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| Protein GI | 172064324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTGCT ATCCGCTGGC GCGGCGGCCG ATTTGTGCCG CGCTGTTCGG CGTGTTCGGC
CTGTCCGCCG CCCTCGCTTA CGCCGATTCC ACCGCTAACG CCGCTAACGC CACTTACGTC
GATTCGTCGT CGAAAGGCGC CAACCCGCGG TCTGCCGTCC TAGCCGCCGC ATCCGCGCGC
GGCGATGCGG CGCTGCTCGA CCCCGTCACC GTCACGGCCA CCCGTACCGC CACCGCCGCG
AGCCGCACGG CCGCGTCCGT GTCGGTGATC ACCGACGACG ATCTCGAGGA ACAGCAGGCC
ACCAACATCA AGGACGCACT GCGCTACGAG CCGGGCGTCA CGGTGCGCCG CACCGCGTAT
CGCCCCGGCA GCGCCGCGCT CGGCGGCGGC CGCGACGGCG ATTCGAGCAT CAACATCCGC
GGCCTCGAAG GCAATCGCGT GCTGCTGATG GAAGACGGCA TCCGCTTGCC GAACGCGTTC
TCGTTCGGGC CGCTCGAAGC CGGGCGCGGC GACTACGCGG ATCTCGACAC GCTCAAGCGC
ATCGAGATCC TGCGCGGGCC GGCATCGGCG CTGTACGGCA GCGACGGGCT GACCGGCGCG
GTGAACTTCA TCACGAAGGA TCCGCGCGAC CTGCTGTCGA TCTACGGCAA ACCCACCTAC
TTCTCGTTCC GGCCGAGCTA CGACTCGGCC GATCGCAGCG TCGGCGCGAC GGTGTCGGCC
GCGGCCGGCA ACGACCGCGT GCAGGGAATG ATCATTGCCG ACGGCCGGCG CGGCCATGAA
GTCGACACGC GCGGCAGCAA CAATTCGGCG AGCACGTTGC GCACGACGTC GAACCCGCAG
GACGTCTATT CGGAATCGCT GCTCGGCAAG CTCGTGCTAA CGCCCACCGC ACGCGACACG
ATCAAGTTCA CGGCCGAAAC CGTGCAACGC CGCGTGAGCA CCGACGTGCT GTCCGCGATC
AACCGGCCGG ACACGCTCGG CCTCTCGACC CACGACCGCC TCGAGCGCAA CCGCTTCAGC
GTCGACTATG ACTTCCGCGA CGATGCATTG CGCTGGTTCC AGACCGCGCA CGTGCAGTTC
TACTACCAGG ACGCGAAGCA GGACCAGTAC GCGTTCGAGA CGCGCGGCAG GCAGCCTTCG
CGCTCCCGCG ACAACGAGTA CCAGGAGCGC ACGTTCGGCG GTTCGGCGTT CGCCGAAAGC
GGCTTCTCGA CCGGCCCGCT CGCGCACAAG TTGCTGTATG GCGTCGACGG CAGCTTGTCG
CGCGTGACGA ACCTGCGCGA CGGCACGGTG CCGGGCGTCG GCGAGTCGTT CCCGAACAAG
GCGTTTCCCG ATACCGACTA CACGCTGTTC GGCGCGTTCG TGCAGGACCG GATCGGTTAC
GGCCGCCTGC TCGTCACGCC GGGGCTGCGC TTCGATACGT ACCGGCTGAG CGCGTCGCAG
AACGATCCGT TGTTCACCGG CACCGCGGTG TCGACGAGCG CGAACGAAGT GTCGCCGCGC
GTCGCGGTGC TCTACGAGAT CACCCCCGCG CTGATTCCGT ATGCGCAATA CGCGCACGGC
TTTCGCGCAC CGACACCCGA CCAGGTGAAC AGCAGCTTCT CGAACCCGGT GTACGGCTAC
ACGTCGATCG GCAATCCGAA CCTGAAGCCG GAGACCAGCG ACACGTTCGA AGCGGGCCTG
CGCGGCAAGG CCGGCACCGG CTACGGCATC GTGCGCTACA GCGCGGCCGC GTTCACCGGC
CGCTACCGCG ACTTCATCTC GCGCACGACG ATCTCGGGCA GCGGCCGCCC GGTCGACCCG
TTCGTGTTCC AGTACGTGAA CTTCGCCGAC GCGCGCATCC ACGGCCTCGA AGGCCGCGCC
GAATGGGTCA TGCCCAACGG CATCACACTG AAGACGGCGA TGGCGTTCAC CCGCGGCTCG
ACCCGAAACG ACGGCGCGGC GAGCCAGCCG CTGAACACGA TCGATCCGTT CTCGGCGGTG
TTCGGCGTGC GCTACGAGCC CGGCGAGCGC TGGTTCGTGC AGACCGACCT GCTGTTCCAG
GCCGCGAAAC GCGACAACGA CATCGACAAG TCCGACTGCT CGAACAAGGC GTGTTTCGCG
CCGCCGTCGT CGTTCGTCGT CGACCTGCGC GGCGGCTATC GCTTCAACAA GCACGTGAGC
GCGACGATCG GCATCCGCAA CCTGTTCGAC CGCAAATACT GGAACTGGTC GGACGTGCGC
GGCATCGCGG CCGATTCGCA GGTGCTCGAC GCGTACACGT CGTCCGGACG CACCGTCGCC
GTCAGCATGA AGGTGGATTT CTGA
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| Protein sequence | MHCYPLARRP ICAALFGVFG LSAALAYADS TANAANATYV DSSSKGANPR SAVLAAASAR
GDAALLDPVT VTATRTATAA SRTAASVSVI TDDDLEEQQA TNIKDALRYE PGVTVRRTAY
RPGSAALGGG RDGDSSINIR GLEGNRVLLM EDGIRLPNAF SFGPLEAGRG DYADLDTLKR
IEILRGPASA LYGSDGLTGA VNFITKDPRD LLSIYGKPTY FSFRPSYDSA DRSVGATVSA
AAGNDRVQGM IIADGRRGHE VDTRGSNNSA STLRTTSNPQ DVYSESLLGK LVLTPTARDT
IKFTAETVQR RVSTDVLSAI NRPDTLGLST HDRLERNRFS VDYDFRDDAL RWFQTAHVQF
YYQDAKQDQY AFETRGRQPS RSRDNEYQER TFGGSAFAES GFSTGPLAHK LLYGVDGSLS
RVTNLRDGTV PGVGESFPNK AFPDTDYTLF GAFVQDRIGY GRLLVTPGLR FDTYRLSASQ
NDPLFTGTAV STSANEVSPR VAVLYEITPA LIPYAQYAHG FRAPTPDQVN SSFSNPVYGY
TSIGNPNLKP ETSDTFEAGL RGKAGTGYGI VRYSAAAFTG RYRDFISRTT ISGSGRPVDP
FVFQYVNFAD ARIHGLEGRA EWVMPNGITL KTAMAFTRGS TRNDGAASQP LNTIDPFSAV
FGVRYEPGER WFVQTDLLFQ AAKRDNDIDK SDCSNKACFA PPSSFVVDLR GGYRFNKHVS
ATIGIRNLFD RKYWNWSDVR GIAADSQVLD AYTSSGRTVA VSMKVDF
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