| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5307 |
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| Symbol | |
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| ID | 6180021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2528359 |
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| End bp | 2529279 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685062 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811967 |
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| Protein GI | 172064316 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0037216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TCCGCAACCA CCTGAACATC GCGCAGCTCC AGGCGTTCGT CTCCGCCGCG
CATCACAAGA GCCTGCGCGC CGCCGCGCGC GAGCTCGGCG TCACGCAGCC CGCGATCACG
CATACGATCC GCGAACTCGA AACGGCGCTG AACGCGGAAC TGCTCGTGCG CAGCGTGCGC
GGCGTCGAGC TGACCGCGTG CGGCCATGCG CTGCTGCCGC GCGCCGAGCA ATTGCTCGGC
GACATGCGCC GCACCGTCGA GGCCGTCGAG CAGGTGAAAG GGGAAATGTC CGGGCGCGTC
GCGGTCGGCA CGATGCCGTC GATCGCGCTG ACCGCGCTGC CGCACGCGGT CACCGCATTC
CGCCGGTCGA TGCCGAACGT CAGCCTGCAT CTCGAGGAAG TGACGGTGCC CGACGCGCTC
GCGCAGCTGC GCAACGGCAC GCTCGATATC GCTGCAATGC ACCATGTGCC CGCACTCGAC
CGCGATTTCA CGCAGGTGCC GCTGCTGTCG ACCGAATTCA CCGTCGTGAT GCGCGAAGGC
CACCCGCTCG CGCACGCGCG CCGGTTAGAG GAAATGCTCG ACGCCGAGTG GATCGTCACG
GTCGGCGCCG AGCAGCTCCC GCACAGCGTG ATGAGCGCGA TGTTCGATGC GCGCGGGCTA
CCGCTGCCGA AGCGCCTGCT GCGCTCGCCG ATGTCGTTCG CGGTGACGCT CGGGCTGGTC
GCGCGCTCCG ACGTGATCGG CTGTTTCACA CGCCCGCTGG CCGCGATGGT GGCGCCGCTC
GGCATCCGCA CGGCCGAGCT CGACGAAAGC ATGCCGCGCT TCGACCTGTC GATCATCGCG
CGCCGCGACC TGCTGCCGAC GCCCGCCGTC TCGGAATTCG TCGGTTGCCT GCAGCGCGCG
GTCAACGAAA CGCTCGGCTG A
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| Protein sequence | MTRIRNHLNI AQLQAFVSAA HHKSLRAAAR ELGVTQPAIT HTIRELETAL NAELLVRSVR
GVELTACGHA LLPRAEQLLG DMRRTVEAVE QVKGEMSGRV AVGTMPSIAL TALPHAVTAF
RRSMPNVSLH LEEVTVPDAL AQLRNGTLDI AAMHHVPALD RDFTQVPLLS TEFTVVMREG
HPLAHARRLE EMLDAEWIVT VGAEQLPHSV MSAMFDARGL PLPKRLLRSP MSFAVTLGLV
ARSDVIGCFT RPLAAMVAPL GIRTAELDES MPRFDLSIIA RRDLLPTPAV SEFVGCLQRA
VNETLG
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