Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5295 |
Symbol | |
ID | 6181126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2516421 |
End bp | 2517623 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641685050 |
Product | major facilitator transporter |
Protein accession | YP_001811955 |
Protein GI | 172064304 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.445705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTTG CCCTGCTTGC GCTGACCATC AGCGCGTTTG CCATCGGCAC CACCGAATTC GTGATCGTCG GGCTGATCCC GACGATCGGC GCCGACCTCG GCGTCAGCCT GCCGTCGGCC GGCCTGCTCG TCAGCCTCTA TGCGCTGAGC GTCGCGATCG GCGCGCCGCT CCTCACCGCG CTCACCGGCC GCGTGCCGCG CAAGACGCTG CTCGCCGCGC TGATGGCGCT GTTCACCATC GGCAACCTCG TGGCCTGGCA GGCGCCGGGC TACGAATCGC TGATCGTCGC GCGCGTGCTC ACCGGCCTCG CCCACGGCGT GTTCTTCTCG GTCGGCTCGA TCATCGCGAC CACGCTCGTG CCGAAGGACA AGGCCGCCAG CGCGATCGCC ACGATGTTCA GCGGGATGAC CGTCGCGTTC GTCGCCGGCA TTCCGCTCGG CACCTTCATC GGCCAGCACT TCGGCTGGCG CGCGACGTTC CTGATCGTCG CGCTGTTCGG CCTCGTCGCG TTCGTCGGCG CGGTCGCGTT CGTGCCGCGC GGCCTCCCGC GCACGCCGCC GGCGCCGCTC GCCCGCCAGT TCCGCGTGCT CGCCCAGCCG CGCCTGCTGC TCGTCTACGC GATGACGGCG GTCGGCTACG GCGGCTCGCT GATCGCGTTC ACCTACATGG CGCCGCTGCT CGAACAGATC GCCGGCTTCA CGCCGTCGCA GGTCAGTCTC GTGCTGGTCG GCTACGGCGT GTCGGTCGCG TTCGGCAACG TGTGGGGCGG CAAGCTCGCG GACGCCGTCG GCCCGGTCAA AGCGCTCAAG CGGATCTTCC TGTTGCTCGC GATCGTGCTG CTCGCGCTGA CCTTCACGGT GCACGTGAAG TGGCTCGCGG TGCTGACGAT GCTCGCATGG GGCGCAGTCG CATTCGGCAA CGTGCCGGGC CTGCAGGTGT ATGTCGTCAA GCAGGCGCGC CACTTCGCAC CGGATGCCAC CGACGTCGCG TCGGGCTTCA ACATCGCCGC GTTCAACCTC GGCGTCGCGG GCGGCTCGTC GCTCGGCGGC CTGATCGTCG CGAACGTCGG CCTCGGCCAT ACGCCGTGGA TCGCCGCCGC CGTCACGCTC GGCGCCTTCG CGCTGACCGC GTTGAGCGGC CGCCTCGACC GCGGCCAGGG GCTGCCCGAG CGCACGGCCG AACCCGTCGA ACTCGCCCAT TGA
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Protein sequence | MPLALLALTI SAFAIGTTEF VIVGLIPTIG ADLGVSLPSA GLLVSLYALS VAIGAPLLTA LTGRVPRKTL LAALMALFTI GNLVAWQAPG YESLIVARVL TGLAHGVFFS VGSIIATTLV PKDKAASAIA TMFSGMTVAF VAGIPLGTFI GQHFGWRATF LIVALFGLVA FVGAVAFVPR GLPRTPPAPL ARQFRVLAQP RLLLVYAMTA VGYGGSLIAF TYMAPLLEQI AGFTPSQVSL VLVGYGVSVA FGNVWGGKLA DAVGPVKALK RIFLLLAIVL LALTFTVHVK WLAVLTMLAW GAVAFGNVPG LQVYVVKQAR HFAPDATDVA SGFNIAAFNL GVAGGSSLGG LIVANVGLGH TPWIAAAVTL GAFALTALSG RLDRGQGLPE RTAEPVELAH
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