| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5291 |
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| Symbol | |
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| ID | 6181437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2511931 |
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| End bp | 2512812 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685046 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811951 |
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| Protein GI | 172064300 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.993386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.426918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAG TCTGGCTGGT GACAGGGGCC GCACGCGGCC TGGGGCGTGC AATCTCGGAA
GCGGTGCTGG CGGCGGGCGA CCGGCTGGTG GCCGGCGCGC GCGATCCGGC GCGGCTCGCC
GATCTGGAAG CGCGGTACGG CGACCGGCTG CTGCCGATCG AGCTCGACGT GACCGACGCA
GCGGCGGCCG CGCATGCGGT GGCCGCCGCC CGCGACGCGT TCGGGCGCAT CGACGTGCTG
GTGAACAACG CGGGCTACGG TCATACGGCG CCGTTCGAGC AGATGGGCGC CGACGACTTC
CGCGACCAGA TCGAAACGAA CCTGTTCGGC GTGGTCAACC TGACGCGAGC GGTGCTCCCG
ACGATGCGGG CGCAACGCGC GGGCCACATC TTCCAGGTAT CGTCGGTCGG CGGGCGCACG
GCGACGGCCG GCCTGTCCGC GTATCAGGCC GCGAAGTGGG CGGTCGGCGG GTTCAGCGAC
GTGCTGTCGA AGGAAGTCGC GCCGTTCGGC GTGCGCGTGT GCACGCTCGA GCCGGGCGGG
ATGCGCACCG AATGGGCCGC GCAGGCGAAG CGCCACGTCG ACGGCCTGCT GCCCGACTAT
GAGCCGTCGG TCGGGAAGGT TCTCGAACTG CTCGGTTCGT ATGGCGGCCA CGAGGTCGGC
GATCCCGCAC GGATCGCAGC GCTGATCGTC GAGCTGTCGC GTCGCGACGA CGTGCCGATG
CGCCTGCTGC TCGGCAGCGA TGCGCTGTTC GTATGCGAGC AGGCGGAAAC GCAGCGCGCG
GAGGAGGCGG CACGGTGGCG GGACGCGACG CTGTCGACGA TGTTCCCGGA CGCGCCGCTG
CCGGACGGGT TGGAGGCGTT GAAGGAGTGG AGCGAGCGCT GA
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| Protein sequence | MSKVWLVTGA ARGLGRAISE AVLAAGDRLV AGARDPARLA DLEARYGDRL LPIELDVTDA
AAAAHAVAAA RDAFGRIDVL VNNAGYGHTA PFEQMGADDF RDQIETNLFG VVNLTRAVLP
TMRAQRAGHI FQVSSVGGRT ATAGLSAYQA AKWAVGGFSD VLSKEVAPFG VRVCTLEPGG
MRTEWAAQAK RHVDGLLPDY EPSVGKVLEL LGSYGGHEVG DPARIAALIV ELSRRDDVPM
RLLLGSDALF VCEQAETQRA EEAARWRDAT LSTMFPDAPL PDGLEALKEW SER
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