Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5270 |
Symbol | |
ID | 6180851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2485069 |
End bp | 2485857 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641685025 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001811930 |
Protein GI | 172064279 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC TTCCGACAGT CCTCATCACC GGCGCCTCCA GCGGCATCGG TGCCACCTAC GCCGAGCGCT TCGCCCGGCG TGGCCATGAC CTCGTCCTCG TCGCCCGTGA CAAGGCGCGA CTCGATGCGT TGGCAGCGCG CCTGCGTGAG GAAAGCGGCG TGGCCGTGGA AGTGCTGCAG GGCGACCTGA CCCAGTCTGC CGATCTGTCC GCGCTCGAGG CCCGTCTGCG CGATGACAAT CGAATAGGAA TTCTGATCAA CAATGCCGGC GTGGCTCAGT CGGGCGGCTT CCTGCAGCAA ACCTCTGAAA GCGTCGAACG CCTGATCACG CTCAACACGA CGGCGCTGAC GAGGCTTGCA GCCGCGGTCG CGCCACGCTT TGTGCAGTCC GGTAATGGCT CGATCGTCAA CATTGGCTCG GTGGTGGGTT TCGCGCCCGA GTTCGGCATG TCGATCTACG GCGCGACCAA GGCATTCGTG CTGTTCCTGT CGCAGGGCCT GAATCTCGAG TTGTCACCCA AGGGGGTTTA CGTGCAAGCC GTCCTGCCGG CGGCGACGCG CACGGAGATC TGGGAGCGCG CCGGGGTCGA CGTGAACACG CTGCCCGAGG TGATGGAAGT GGGCGAGCTG GTTGATGCGG CACTGATCGG GTTCGACCGT CGCGAACTGG TCACGATCCC GCCGCTGCAC GTAGCCGGGC GGTGGGACGC GCTGGATGGC GCTCGCCAGG GACTGTTGTC GGACATTCGA CAGGCACACG CGGCCGAGCG TTATCAGCTT CGCGCCTGA
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Protein sequence | MTTLPTVLIT GASSGIGATY AERFARRGHD LVLVARDKAR LDALAARLRE ESGVAVEVLQ GDLTQSADLS ALEARLRDDN RIGILINNAG VAQSGGFLQQ TSESVERLIT LNTTALTRLA AAVAPRFVQS GNGSIVNIGS VVGFAPEFGM SIYGATKAFV LFLSQGLNLE LSPKGVYVQA VLPAATRTEI WERAGVDVNT LPEVMEVGEL VDAALIGFDR RELVTIPPLH VAGRWDALDG ARQGLLSDIR QAHAAERYQL RA
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