Gene BamMC406_5259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5259 
Symbol 
ID6181433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2469301 
End bp2470755 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content58% 
IMG OID641685015 
Productpyruvate kinase 
Protein accessionYP_001811920 
Protein GI172064269 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTA GCCTCATCTC TGCTTGCGCG AACATCTCGC CTCGCCTCTC CCGCAGGAAG 
TCTCACCTCA ACGCGACGCT CGGACCGTCT AGCTCGTCCG AAAGCTTGAT TGAGAGCCTC
TATATCTCCG GCGCCGATGT CTTCCGGTTG AACATGAGTC ACGGCAGCCA CGCGGAGCAG
GCTCAACGAC TGCTTGCAAT TCGACGCATC GAGGCCCGAC ATGGGCGGCC GGTCGGCGTA
CTGCTCGATC TGCAAGGACC AAAGCTACGT GTGGCGCGAT TCAAAGATGG GAAAGTCGAG
CTGCGGCCAG GACAGACTTT CAGCTTCGAC CTTGATAGCG CCTCAGGCGA CGCGTCGCGG
GTCTGCCTGC CGCACCCGGA AATCTTCGCA GTCGCCGCGA ATGGCGATAC TCTACTCGAC
AACGACGGCC TGCTGACGTT CAGGATTGTC GACACGTCGC TCACCCGCAT TACGACCGAA
GTCGTTGTCG GTGGAGTCCT CTCGGACCGA AAAGGAGTCA ATGTTCCGAG CGTCGTCCTC
CCCATTCCGG CACTGACCGA TAAGGACAGG CAAGATCTGC AATTTGGCCT TGAGCAAGGC
GTAGAGTGGA TCGCACTGTC ATTTGTACAG CGGCCTGACG ATGTGCGCGA TGCGCGTAAT
CTGATTAGAG GCCGGGCGAA GATCATGGCG AAAATCGAGA AGCCATCCGC TGTCGATTCG
ATCGAAGAGA TTATCGAGGC CTCCGACGGA ATCATGATCG CGCGTGGCGA TATGGGTGTT
GAGTTGCCAC CGGAGGAAGT CCCTGTCATC CAGAAGCGGA TCGTGAGTCT ATGTCGGGAG
GCAGGAAAAC CAGTCGTTGT GGCGACGCAA ATGCTGGAGT CGATGGTTAG TTCTGCCATG
CCCACCCGAG CAGAGACGTC CGATGTCGCG ACCGCCGTTT TTGACGGTGC CGATGCCGTC
ATGCTGTCCG CGGAGTCCGC GTCCGGTGCC TTTCCCCTTG AAGCGGTTTC GATGATGAAT
AGAATCATCG AGCACACGGA GAATGCACCG ACATATCGTC AACTGCTAAA AGCGGTGGCA
CCGCCTACCA CCGCCGACAC ACCAGAAGCG ATCAGTGCAG CGATTTTCAC CATTACCTCG
ATGTTGTCGG TTTCAGCGAT CGTTGCCTAT ACCACTTCCG GCGCAACCGC AGCGAGAATT
GCTCGCGAGC GTCCCGGCTG CCGCATTCTG TCACTCACAC CTGATGAGGT CGTTGCGCGT
CAACTTGCGT TGACGTGGGG CGCCTGTCCT CTGCGTGTCG ACGACGCGGA TAACATCGAA
GATATGGTCA CGAAAGCTAT AGCTGCGGCG CATCGGATCG GTGTCGCCCG CCACAAACCG
CTATTGATCG CCGCAGGTGT CCCGTTTGGC ACGCCCGGCG TCAGCAATCT TCTCAGAATC
GTCTACCCCT CCTGA
 
Protein sequence
MPSSLISACA NISPRLSRRK SHLNATLGPS SSSESLIESL YISGADVFRL NMSHGSHAEQ 
AQRLLAIRRI EARHGRPVGV LLDLQGPKLR VARFKDGKVE LRPGQTFSFD LDSASGDASR
VCLPHPEIFA VAANGDTLLD NDGLLTFRIV DTSLTRITTE VVVGGVLSDR KGVNVPSVVL
PIPALTDKDR QDLQFGLEQG VEWIALSFVQ RPDDVRDARN LIRGRAKIMA KIEKPSAVDS
IEEIIEASDG IMIARGDMGV ELPPEEVPVI QKRIVSLCRE AGKPVVVATQ MLESMVSSAM
PTRAETSDVA TAVFDGADAV MLSAESASGA FPLEAVSMMN RIIEHTENAP TYRQLLKAVA
PPTTADTPEA ISAAIFTITS MLSVSAIVAY TTSGATAARI ARERPGCRIL SLTPDEVVAR
QLALTWGACP LRVDDADNIE DMVTKAIAAA HRIGVARHKP LLIAAGVPFG TPGVSNLLRI
VYPS