| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5204 |
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| Symbol | |
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| ID | 6180450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2402506 |
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| End bp | 2403420 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684960 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001811865 |
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| Protein GI | 172064214 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.484805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.145003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAC CGCAAGAACT CAAACAAATC ATCTCCCACG GCCTGCTGTC GTTTCCGCTG
ACGGACTTCG ACGCGGACGG CAGCTTCCGC CCGACCACCT ATGCGGAGCG CCTGGAATGG
CTGGCGCCGT ATGGCGCGAC CGCGCTGTTC GCGGCCGGCG GCACCGGTGA ATTCTTCTCG
CTCACGCAGC GCGAGTATTC GGACGTGATC CGCGTCGCGA CGGAAACCTG CAAGGGCAAG
GTGCCGATCC TGGCCGGCGC CGGCGGCGCG ACGCGCGTCG CGATCGAATA TGCGCAGGAA
GCCGAGCGCC TCGGCGCGAG CGGCGTGCTG CTGATGCCGC ACTACCTGAC CGAAGCCAGC
CAGGAAGGCA TCGCCGAACA CGTCGAGCAG GTGTGCCGCG CGCTGAAGAT CGGCGTCGTG
GTGTACAACC GCGCGAATTC GAAGCTGAAC GCCGACATGC TCGAGCGCCT CGCCGATCGT
TGCCCGAACC TGATCGGCTT CAAGGACGGC GTCGGCGAAA TCGAGAGCAT GGTCACGATC
CGCCGCCGCC TCGGCGACCG CTTCGCGTAC CTCGGCGGCC TGCCGACGGC CGAAGTCTAC
GCAGCCGCGT ACAAGGCGCT CGGCGTGCCG GTGTACTCGT CGGCCGTGTT CAACTTCATC
CCGAAGACGG CGATGGAATT CTACGAAGCG ATCGCGAAGG ACGACCACGC GACGGTCGGC
CGCCTGATCG ACGAGTTCTT CCTGCCGTAC CTGCAGATCC GCAACCGTCG CGCGGGCTAC
GCGGTCAGCA TCGTGAAGGC GGGCGCGAAG CTCGTCGGCC ACGACGCGGG CCCGGTGCGC
GCGCCGCTCG TCGATCTCAA CGACGCCGAA GTCGCCGAAC TGGACGTGCT GATCAAGAAG
ATGGGCCCAC AATAA
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| Protein sequence | MTSPQELKQI ISHGLLSFPL TDFDADGSFR PTTYAERLEW LAPYGATALF AAGGTGEFFS
LTQREYSDVI RVATETCKGK VPILAGAGGA TRVAIEYAQE AERLGASGVL LMPHYLTEAS
QEGIAEHVEQ VCRALKIGVV VYNRANSKLN ADMLERLADR CPNLIGFKDG VGEIESMVTI
RRRLGDRFAY LGGLPTAEVY AAAYKALGVP VYSSAVFNFI PKTAMEFYEA IAKDDHATVG
RLIDEFFLPY LQIRNRRAGY AVSIVKAGAK LVGHDAGPVR APLVDLNDAE VAELDVLIKK
MGPQ
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