| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5194 |
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| Symbol | |
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| ID | 6179882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2391546 |
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| End bp | 2393438 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684950 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001811855 |
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| Protein GI | 172064204 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCT CGATCGCCAC CGTGTCACTG TCCGGCACCC TTGCCGAGAA GCTCGCCGCC
GTCCAGGCCG CCGGCTTCGA CGGTGTCGAA ATCTTCGAGA ACGACCTCGT CTACTTCGAC
GGATCGCCGG CCGACGTGCG GCGCATGGCC GCCGATCTCG GCCTCGACAT CGTGCTGTTC
CAGCCGTTTC GCGACTTCGA GGGCGTGAGC CCGGCCCAGC TCGCCCGCAA TCTCGACCGC
ATCCGGCGCA AGTTCGATGT GATGCACGCG CTCGGCACCG ACCGCATCCT GGTGTGCAGC
AACGTGTCGC CCGACACGAT CGCGGACGAC GCGCTGCTGG TCGACCAGCT CGGCGCGCTC
GCCGAAGCCG CGCGGCAGGC CGGCGTGGTC GCCGCGTACG AGGCGCTCGC GTGGGGCCGC
GTCGTGAAGC GGTACGGCCA TGCGTGGCAG CTCGTGAATG CGGTGAACAG CCCGCACCTC
GGCCTCGCGC TCGACAGCTT CCATACGCTG TCGCTCGACG ATTCGCCGGA CGCGATCGCC
GACATCCCCG GCGACCGGAT CGCGTTCGTG CAGATCGCCG ATGCGCCGAA GCTCGCGATG
GACGTGCTCG AATGGAGCCG CCACTTCCGC TCGTTCCCCG GCCAGGGCGA CTTCGACCTC
GCACGCTTCA CGGCTCGCGT GATCGAGTCC GGCTATACGG GGCCGCTGTC GCTCGAGATC
TTCAACGACG GCTTCCGCGC CGCGCCGACC GCGATCACGG CCGCCGACGG CCACCGCTCG
CTGCTCTATC TGGAAGAACT GACGCATGCG CGGCTCGCAC AGGACGGCCG TGCGCCGGCT
GCCGACCAGC CGCTGTTCGC GCCGCCGGCG CCGCCCGCGC ACGTCGGGTT CCAGTTCATC
GAGTTCGCGG TCGACGCGCA GGCCGCAGCC ACCGTCGGCG CATGGCTCGG CAAGATGCGG
TTCCGGCTCG CGGGCCGCCA TCGGTCGAAG GACGTAACGC TGTTCCAGCA CGGCGCCGCG
TCGATCGTGC TGAACGCCGA GCGCGACTCG TTCGCCGATG CGTTCTTCCA GCAGCACGGG
TTGTCGCTCT GTGCGTCGGC GTTTCGCGTC GACGATGCGA AAGTGGCGTT CGAACGCGCG
GCCGGCTTCG GCTATGCGCC GTTTTCCGGG CGCGTCGGCC CGAACGAGCG CGTGCTGCCG
AGCGTGCAGG CGCCGGACGG CAGCCTCGAA TACTTCGTCG ACGAGACGCC GAACGCGCCG
ACGCTGTATG AATCGGATTT CGTGCTGACC GACATCGACG GCCCCACCGA GGTCGGCCCG
CTGACGGGCA TCGACCACGT GTGCCTCGCG CTGCCGGCCG ACGCGCTCGA TACGTGGATC
CTGTTCTTCA AGACCGCATT CGGCTTCGAG GCCGAACGCA GCTGGCTCGT GCCCGACCCG
TACGGCCTGA TGCGCAGCCG GGCGGTGCGC AGCGCGGACG GCTCGGTGCG GATCGCGCTG
AATGCGTCGG TCGACCGCCA TACGGCCGTC GCCGAATCGC TGGACCGCTA TCACGGCACG
GGGCTGAATC ACGTCGCGTT CCGGACCGAC GACATCGTGA AGACGGTCGC CGCGTTCGCA
GCCGACGGCG TGCCGTTCCT GCGGATCCCG CCGAACTACT ACGACGATCT CGCCGCGCGC
TACGCGCTGC CGGACGAATT GATCGACACG CTGAGCGCCC ACCATCTGCT GTACGACCGC
GACGAAAACG GCGGCGAATT CCTGCATGCG TACACGGAAC TGGTCGACAA CCGCTTCTCG
CTCGAGATCG TCGAGCGGCG CGGCGGCTAT GACGGCTACG GTGCGACAAA CGCGGCCGTG
CGGCTCGCCG CGCAGGCCCA GCGCAGGAAA TAA
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| Protein sequence | MQRSIATVSL SGTLAEKLAA VQAAGFDGVE IFENDLVYFD GSPADVRRMA ADLGLDIVLF
QPFRDFEGVS PAQLARNLDR IRRKFDVMHA LGTDRILVCS NVSPDTIADD ALLVDQLGAL
AEAARQAGVV AAYEALAWGR VVKRYGHAWQ LVNAVNSPHL GLALDSFHTL SLDDSPDAIA
DIPGDRIAFV QIADAPKLAM DVLEWSRHFR SFPGQGDFDL ARFTARVIES GYTGPLSLEI
FNDGFRAAPT AITAADGHRS LLYLEELTHA RLAQDGRAPA ADQPLFAPPA PPAHVGFQFI
EFAVDAQAAA TVGAWLGKMR FRLAGRHRSK DVTLFQHGAA SIVLNAERDS FADAFFQQHG
LSLCASAFRV DDAKVAFERA AGFGYAPFSG RVGPNERVLP SVQAPDGSLE YFVDETPNAP
TLYESDFVLT DIDGPTEVGP LTGIDHVCLA LPADALDTWI LFFKTAFGFE AERSWLVPDP
YGLMRSRAVR SADGSVRIAL NASVDRHTAV AESLDRYHGT GLNHVAFRTD DIVKTVAAFA
ADGVPFLRIP PNYYDDLAAR YALPDELIDT LSAHHLLYDR DENGGEFLHA YTELVDNRFS
LEIVERRGGY DGYGATNAAV RLAAQAQRRK
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