| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5157 |
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| Symbol | |
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| ID | 6179764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2336757 |
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| End bp | 2338943 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641684908 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001811818 |
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| Protein GI | 172064167 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.819615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGTT CCACTCTCCG GCCTCCGGCG TCGTCTCCGA CGCAGGATGT CGACTCCGGT
CTCGCCGTCG TTCTGACGAT GGCCAGCCTG CACGGCATCG CAGCCGACGA AGCCGCGTTG
CGACATGAAT TCGGCTTCGG CCATTTCGAT ACTCAAACAA TCCTGCGAGC CGCGCGCTCA
CTTGGCATGA CGGCCCGGGC CGTTCAACAG AACTTCGAAC GACTGGATCG GGCGCCTTTG
CCCGCGGTCG CACAGATGAA GGGCGAAGGT GGCTATTTCG TGGTCGCGCA GTATCAAGCC
GGGGATGGAA CGCGCGCGCC TCGAACGCTT GTCCAGTTTC CGGGCGAGGC GCCAATCGTG
ATGACGCGCG AGCGTCTTCT GGAAATCTGG ACGGGTGAGC TCATCTACTT CACGAGCAAG
AGCAGCATTG CGGGCACCTT GGCGCGCTTC GATTTCAGCT GGTTCATTCC GGCAATCGTC
ACATATCGAA AACTGCTGGG CGAAGTCCTC GTGATTTCTC TCGTGTTGCA GTTGATCGCG
CTTGCCACGC CGCTCTTCTT CCAGGTGGTG ATGGACAAGG TGCTGGTCAA TCACGCGATG
AAGACGTTGA ACGTGATCGC CGTGGGGTTG ATTTGCGCGA CGCTGTTCGA AGCGGCGCTT
TCGGGGATAC GAACGTGGGT CTTCGCGCAT ACCAGCAGCA AGATCGACGT CGAACTCGGC
GCGCGGCTCT TCCGTCATCT TCTGGCATTG CCGCTGGCAT GGTTTCAGGC GCGCCGTGTA
GGCGATTCCG TCGCCCGTAT TCGCGAGCTG GAGAACATTC GCGCGTTCCT CACCGGCAAC
GCCGTGACGC TGGTGATGGA CCTCGCGTTT TCGTTCGTTT TCCTCGGTGT GATGCTCTGG
TACAGCGCGT GGCTCACGTT GATCGTCGTC GTTTCGATTC CGCTCTACGT GCTGTTGTCG
GTCGTGTTTA CGCCGATCAT TCGGCGGCGC CTGAACGAGA AATTCAACAA GGGCGCCGAG
AATCAGTCGT TCCTCGTTGA AACCATCAGC GGAATCGATA CGGTCAAGGC GATGGCACTC
GAACCGCGCT GGACGGACCG ATGGGACCGT CAATTGGCTG CTTATGTGAG TTCGGGCCTG
TCGGCGACCA ACGTTGCCAC GATTGCAAGC GGTGGCGTGA CGTTGATCAG CAAGCTGGTC
ACCGCGGCGA TCATGTGGCT GGGCGCCACG CTGGTGATCG ACGGAAAGTT GACTGTCGGC
GAGCTCGTCG CGTTCAACAT GCTGGCCGGG CAGGTATCCA GTCCGATACT GCGTCTCGCG
CAGCTGTGGA ACGACTTTCA ACAGGTGGGG ATTTCGATGG GGCGCCTCGG GGATATCCTG
AACGCGGCGC CCGAAACCGC AGCGAAAAAG ACGCGAGTAC CCCGTCTCGC CGGTGCGATC
GAATTCGACC AGGTATCGTT TCGCTACCGG CCGGACGCGA GCGATGTCAT CCGGCAGATC
TCCGTCAGGA TCGCGGCGGG CGAGGTCATC GGAATCGTCG GCCGCTCCGG GTCGGGCAAA
AGCACGCTGA CCAAGCTTGC TCAACGGCTA TACGTGCCGG ATCGGGGGCG AGTGCTGGTC
GACGGGCAGG ATATCGCCGT GATCGATACG GCGAGTCTTC GCCAGCAGAT TGGCGTCGTT
CTGCAGGAAA ACACGCTGTT CAATCGTTCG GTGCGGGACA ACATTGCGCT GGCTCGACCC
ACTGCGTCGA TCGACGCCGT GATCGATGCA GCGAGGCTGG CCGGCGCACA CGAGTTCATC
TGCGAGCTTC CGGAGGGTTA CGACACGCTC GTCGGCGAGC ATGGCACAGG GCTCTCGGGC
GGCCAGCGGC AGCGCATCGC CATTGCTCGC GCATTGATGA CCGATCCACG CATCCTGATA
TTCGACGAGG CGACCAGCGC GCTCGACTAC GAATCCGAAG CGATCGTACA CGCCAACATG
CGGGACATCT GCGCGCGCCG CACGGTATTG ATCATTGCGC ATCGGCTCTC GGCGGTGCGC
GATGCCGACC GGATTCTTGT GATGGACCGC GGGCAGATCG TGGAAATCGG TACGCACGAC
AAACTGCTGC GCATACAGAA CGGCATCTAC GCACACTTGT ATTCGCTGCA ACAGGGCAGT
CGCGACGTAG CGGAGGCGCG GATATGA
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| Protein sequence | MDSSTLRPPA SSPTQDVDSG LAVVLTMASL HGIAADEAAL RHEFGFGHFD TQTILRAARS
LGMTARAVQQ NFERLDRAPL PAVAQMKGEG GYFVVAQYQA GDGTRAPRTL VQFPGEAPIV
MTRERLLEIW TGELIYFTSK SSIAGTLARF DFSWFIPAIV TYRKLLGEVL VISLVLQLIA
LATPLFFQVV MDKVLVNHAM KTLNVIAVGL ICATLFEAAL SGIRTWVFAH TSSKIDVELG
ARLFRHLLAL PLAWFQARRV GDSVARIREL ENIRAFLTGN AVTLVMDLAF SFVFLGVMLW
YSAWLTLIVV VSIPLYVLLS VVFTPIIRRR LNEKFNKGAE NQSFLVETIS GIDTVKAMAL
EPRWTDRWDR QLAAYVSSGL SATNVATIAS GGVTLISKLV TAAIMWLGAT LVIDGKLTVG
ELVAFNMLAG QVSSPILRLA QLWNDFQQVG ISMGRLGDIL NAAPETAAKK TRVPRLAGAI
EFDQVSFRYR PDASDVIRQI SVRIAAGEVI GIVGRSGSGK STLTKLAQRL YVPDRGRVLV
DGQDIAVIDT ASLRQQIGVV LQENTLFNRS VRDNIALARP TASIDAVIDA ARLAGAHEFI
CELPEGYDTL VGEHGTGLSG GQRQRIAIAR ALMTDPRILI FDEATSALDY ESEAIVHANM
RDICARRTVL IIAHRLSAVR DADRILVMDR GQIVEIGTHD KLLRIQNGIY AHLYSLQQGS
RDVAEARI
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