| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5071 |
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| Symbol | |
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| ID | 6180993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2240406 |
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| End bp | 2241479 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684823 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001811733 |
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| Protein GI | 172064082 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.509382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCG ACGTACCCGC TTCCCCCCTC GCCGAACCGG CGCCGCAGCG CATCCGCTTC
GGCATCGTGC TGCTGCCGAA CTTCACGCTC ACGGCCTTCT CGGGTTTCGT CGACATGCTG
CGGCTGTCGG CCGACGACGG CGACTACAGC AAGCCCGTGC GCTGCGCGTG GAGCGTGATC
GGCGAAACGC TGGCGCCGGT GCGCGCGAGC TGCGGGATCC AGATCACGCC GTGGGAAACC
TTCGATGGGG CCGAACCATT CGACTACGTG GTCGTGGTCG GCGGGCTGCT GCACTCCGGG
CCGCAAGCCG GCCCCGAAAC GCTCGAGTTC ATCCGCCGCG CGGCGACGGC CGGCGCGACG
GTCGTCGGGA TCTGCACGGG CGTGTTTACG CTGATGCGCG CGAAGGTGCT CGACGGCTAT
CGCACCTGCG TGAGCTGGTT CCACTACTGG GATTTCATCG AACGCTTCCC GAGCGCCGAT
CCCGACCTGC TGATCGCCGA CCGCCTGTTC GTGATCGACC AGCGCCGCAT CACCTGCTCG
GGCGGCCGCG CGTCGATCGA CGTCGCCGCC GCGATCCTGC TGCGTCATTT CGACCACGCG
ACCGTGCAGA AGGCGCTGCG CATCCTGCTC GTCGGCGAGA TGCAGAAAGG CAATGCGCCG
CAGCCGCATC CGCCGGGCCT CGAGCCGGCC ACGCACCCGA AGGTCAAGCG CGCGATTCTT
CTGATGGAAC AGCATGTCGG GCGCTCGCTG CCGCTCGAGG AACTCGCGTG CAAGCTCGAC
ATGTCGACGC GCCAGCTCGA GCGTCTATTT AAGGCCGAGA CGGGCAGGAG TCCGCAGGCG
TTCGCGAAGC AGGTGCGGCT GCGCACGGCC GCGTGGCTGC TGACCAGTTC CGACCGCACC
GTCGCCGATA TCGCGTCGAG CTGCGGGTTC GCCGATGCGT CGCACCTCGG CCGGGAGTTC
CGCAAGCAGT TCGGCGTGCC GCCGGCCACC TATCGCGAGC GCGGCGGAGA AGTCGCGGAA
GTCGCGGTGC CGGTTGCAAC AGATGCCGAT CCCGTCGAAG ACATCGCCGA CTGA
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| Protein sequence | MTPDVPASPL AEPAPQRIRF GIVLLPNFTL TAFSGFVDML RLSADDGDYS KPVRCAWSVI
GETLAPVRAS CGIQITPWET FDGAEPFDYV VVVGGLLHSG PQAGPETLEF IRRAATAGAT
VVGICTGVFT LMRAKVLDGY RTCVSWFHYW DFIERFPSAD PDLLIADRLF VIDQRRITCS
GGRASIDVAA AILLRHFDHA TVQKALRILL VGEMQKGNAP QPHPPGLEPA THPKVKRAIL
LMEQHVGRSL PLEELACKLD MSTRQLERLF KAETGRSPQA FAKQVRLRTA AWLLTSSDRT
VADIASSCGF ADASHLGREF RKQFGVPPAT YRERGGEVAE VAVPVATDAD PVEDIAD
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