Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5040 |
Symbol | |
ID | 6179399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2206635 |
End bp | 2207459 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684792 |
Product | OmpW family protein |
Protein accession | YP_001811702 |
Protein GI | 172064051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.29501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC TGATTGTCGC GGGTGTCGTC GCAGGCGTGT CGACGCTCGC ATCGGCCCAG CAGGCGGGCG ACAACGTCGC GACGCTGGGC TGGCTGCACA TCATGCCGCA GGATTCGACC AACGGCCTGA CGACGAATCT CGCGAACATG CCGATCAACG GGCCGCTGCG GTTGCCCGGT TCGTTCACGT CGCCGGGCAC GAGCCTGACG GTCAACAACG CCGATACGGT CGGCCTCACG CTCACGCACT TCTTCACCGA CCACATCGCC GTGACGTCGG TGCTCGGCGT GCCGCCCGAG TTCACGCTGA CCGGGCACGG CGTGATCCGG CCGCCGGGCC CGGCCGGCTC GCTCGGCAGC GTCGACATGG ACAAGACGTC GAACCAGCCG GCCGTGAAGA ATGCGCGGCA GTGGAGCCCG ACGATCATTC TGCAGTACTA CTTCAATGCG CCGACCGCGA AGTTCCGTCC GTTCGTCGGG ATCGGCGTCG CCTACAGCTG GTTCAGCAAC ATCGAACTGA ACGGCAACTT CGCGAAGGAC ATCAACGAGA ACCTCGGCAG CGTGCTCGCG GCCGGCGCCG GCAAGCCGGG GCCGACGTCG GTGGAGGGCA AGGCGTCGTC GTCGTTCACG CCGGTCTACA ACGTCGGCGC GAGCTATGCG ATCGACAAGC ACTGGGGGCT CACGGCGACG CTGACCTACA TGCCGCTGAA GACCTACTCG TCGCTCGTGA TCAAGGCGGC CGACGGATCG ACGCTCGCGA CCACGCGCAC GCGGCTGAAG GCCGATCCGC TGATCACGTT CGTCGGCATT TCCTACAAGT TCTGA
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Protein sequence | MKKLIVAGVV AGVSTLASAQ QAGDNVATLG WLHIMPQDST NGLTTNLANM PINGPLRLPG SFTSPGTSLT VNNADTVGLT LTHFFTDHIA VTSVLGVPPE FTLTGHGVIR PPGPAGSLGS VDMDKTSNQP AVKNARQWSP TIILQYYFNA PTAKFRPFVG IGVAYSWFSN IELNGNFAKD INENLGSVLA AGAGKPGPTS VEGKASSSFT PVYNVGASYA IDKHWGLTAT LTYMPLKTYS SLVIKAADGS TLATTRTRLK ADPLITFVGI SYKF
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