Gene BamMC406_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5019 
Symbol 
ID6181076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2179566 
End bp2181629 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content66% 
IMG OID641684771 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001811681 
Protein GI172064030 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.467216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.406194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATC CCCACCTGTT CAAACCCATG CAGCTGAACC AGTTGACGCT GCGCAACCGG 
ATCGTCAGCA CCGCCCACGC GGAGGTGTAT GCCGAGCCGG GCGGCCTGCC GGGCGACCGC
TACATCCGCT ACTACGAAGA GAAGGCGAAG GGTGGCGTCG GCCTCGCGAT CTGCGGCGGC
TCGAGCCCCG TGTCGATCGA CAGCCCGCAG GGCTGGTGGA AGTCGGTGAA CCTGTCGAAC
GACAAGATCA TCGACCCGCT CACGCGCCTG GCCGACACCA TGCACAAGCA TGGCGCGAAG
ATCATGATCC AGGCGACGCA CATGGGCCGC CGCTCGTCGT TCCACGGCGA GCACTGGCCG
CACCTGATGT CGCCGTCGGG CGTGCGCGAG CCGGTGCACC GCGGCAACGC GAAGATCATC
GAGATCGAGG AAATCCGCCG CATCATCGGC GACTTCGCGG CGGCGGCAAA GCGCGTGAAG
GCGGCCGGCA TGGACGGCAT CGAAATCTCC GCCGCGCACC AGCACCTGAT CGACCAGTTC
TGGAGCCAGC GTTCGAACCA TCGCACCGAT GAATGGGGCG GCAGCCTCGA GAACCGCCTG
CGCTTCGGCA TCGAAGTGCT GACGGCCGTG CGCGAAGCGG TGGGCAAGGA CTTCTGCGTC
GGCCTGCGGA TGTGCGGCGA CGAATTCCAC GAGGACGGCC TCGATCACGA AGCGCTGAAG
GAAATCGCGC AGGCGATGTC GGAGACGGGC CTGATCGACT ACCTGAGCGT GGTCGGCTCG
GGCGGCGATA CGCACAACAC GATCGCCAAC TGCATGCCGC CGATGGCGCT GCCGCCGGAG
CCGTTCGTGC ACCTCGCCGC CGGCATCAAG TCGGTGGTAA AGATCCCCGT GATGCACGCG
CAGAGCATCC GCGACGCGGG TCAGGCCGAA CGCCTGCTCG CGAACGGCAT GATCGACCTG
GTCGGCATGA CGCGCGCGCA GATCGCCGAT CCGCACATGG TGATCAAGAT CCGCGATGGC
CGCGAAGACG AAATCAAGCA GTGCGTCGGC GCGAACTACT GCATCGACCG CCAGTACAAC
GGCCTCGACG TGCTGTGCAT CCAGAACGCC GCGACGTCGC GCGAAGCGAC GATGCCGCAC
ATCATCGAGA AGTCGCGCGG CCCGAAGCGC AAGGTGGTGG TGGTCGGCGC GGGCCCCGCG
GGGCTCGAGG CCGCACGTGT CGCGAAGTTG CGCGGCCACG ACGTGGTGCT GTTCGAGAAG
AATGCCGAAG TGGGCGGCCA GGTGATGATC GCCGCGAAGG CGCCGCAGCG CGAACAGATG
TCGGGGATCA TCCGCTGGTT CGACATGGAA ACCAAGCGCC TGGGCGTCGA TCGCCGCCTT
GGCGTCGCCG CCGACGAGAA GATGATCATG GCCGAGAAGC CGGACATCGT CGTGCTCGCC
ACGGGCGGTT CGAGCTTCAC GTGGCAGGTG CCGGCGTGGG GCGTGGCCGA GGGCCTGGCC
GTCAGCTCGT GGGACATCCT GACCGGCAAG GTCGAGCCGA AGGAGAACGT GCTGCTGTTC
GACGGCGTGA GCACCCATGC GGGCGCGGGC GTCGCCGATT TCATGGCGAG CCGCGGCTCG
AAGGTCGAGG TCGTCACGCC CGACGTGAAG GTGGCCGACG ATTGCGGCGG CACGACGTTC
CCGATCTTCT ATCGCCGCCT GTATGCGCTC GGCGTGATCC CGACGCCGAA CACCATGCTC
GATCGCGTGT ACGAGGAGGA CGGCAAGAAG ATCGCCGTGC TGCGCAACGA GTACACCGAA
GAACTGGAAG AGCGCGCGGT CGACCAGGTG GTGATCGAGA ACGGTTCGTC GCCGAATGAC
GAGCTGTACT GGAAGCTCAA GCCGGAGTCG GTGAACCGCG GCCAGATCGA TCCGCACACG
CTGTTCGCGG CCGAGCCGCA GCCGTGCCTG TCGGAAGAAC TCGGCAACGG CCGCTTCCTG
CTGTTCCGTG TCGGCGACTG CATCTCGATG CACAACGTCC ACGGCGCGAT CTATGACTCG
CTGCGTCTCG TGAAGGATTT CTGA
 
Protein sequence
MRYPHLFKPM QLNQLTLRNR IVSTAHAEVY AEPGGLPGDR YIRYYEEKAK GGVGLAICGG 
SSPVSIDSPQ GWWKSVNLSN DKIIDPLTRL ADTMHKHGAK IMIQATHMGR RSSFHGEHWP
HLMSPSGVRE PVHRGNAKII EIEEIRRIIG DFAAAAKRVK AAGMDGIEIS AAHQHLIDQF
WSQRSNHRTD EWGGSLENRL RFGIEVLTAV REAVGKDFCV GLRMCGDEFH EDGLDHEALK
EIAQAMSETG LIDYLSVVGS GGDTHNTIAN CMPPMALPPE PFVHLAAGIK SVVKIPVMHA
QSIRDAGQAE RLLANGMIDL VGMTRAQIAD PHMVIKIRDG REDEIKQCVG ANYCIDRQYN
GLDVLCIQNA ATSREATMPH IIEKSRGPKR KVVVVGAGPA GLEAARVAKL RGHDVVLFEK
NAEVGGQVMI AAKAPQREQM SGIIRWFDME TKRLGVDRRL GVAADEKMIM AEKPDIVVLA
TGGSSFTWQV PAWGVAEGLA VSSWDILTGK VEPKENVLLF DGVSTHAGAG VADFMASRGS
KVEVVTPDVK VADDCGGTTF PIFYRRLYAL GVIPTPNTML DRVYEEDGKK IAVLRNEYTE
ELEERAVDQV VIENGSSPND ELYWKLKPES VNRGQIDPHT LFAAEPQPCL SEELGNGRFL
LFRVGDCISM HNVHGAIYDS LRLVKDF