Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5010 |
Symbol | |
ID | 6180672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2168105 |
End bp | 2169025 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641684762 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811672 |
Protein GI | 172064021 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCCAT TAGAGAGACT TATGTCGAAA TCCGAAGCGT TACCGTCGAT GCAGGCGCTG CGCGCGTTCG AATCGGCCGC CCGTCTCCAG AGCTTCACGG CCGCCGCGCG CGAGCTCGGC TCGACGCAGC CGGCCGTGAG CCAGCAGGTG TTCCAGCTCG AGGCGGAGCT CGGCGTGCCG CTGTTCGAGC GCAGCCCGCG CGGCGTCACG CTGACGAGCG ACGGCCAGTG CCTGTACGAA GCCGTACGGG TGAGTCTCGA CACGCTGCGC GGCGCCACCG CGACGCTGCG CGCGCGCCGC GAGCACGGCG CGCTCACGAT CGTCACGGAT TTCGGCTTCG CGACCTACTG GCTGATGCCG CGCCTCGCGG GGCTGAAGCA CGTGATGCCG GACGTCGACG TGCGGGTCGT CACGTCACAG GATTACGACG CGCAGCGCGA CCACGCCGAC ATCGCGATCC TGTTCGGCGA CGGCCACTGG CCGTCGTGCA CGGCCGCACG GCTCTTTCCC GAATCCGTCA CGCCCGTCTG CTCGCCCGGA TTCCGCGCCG CGCACCCGGA TGTCGCGCGG CCCGACCATC TGCATGCGCT GCCGCTGCTG CACGTGCAGC CGACCCGCCC CGAGCGCTGG CTGTCGTGGG CCGGCTGGTT CGACGCGCAC GGCCTCGACG CGCCGGCCGC CGCGCGCGGC GTGACCTTCA ACAGCTACGC GCTGGTGATC CATGCGGCGC TCCTCGGCGA GGGCGTCGCG CTCGGCTGGT CGCCGCTCGT CGACGAGCTC GTCGCGTCCG GGCAGCTCGT GAAACTCGTC GACGCGCCCG TCGTGACGTC GCGCGGCTAT TTCCTGGTGC GGCCGCCGCA GCGGCCCGAG CCGGACGCGA CCCACGTGTT CCGGCGCTGG CTGCTCGACG CGTGCGCGTG A
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Protein sequence | MGPLERLMSK SEALPSMQAL RAFESAARLQ SFTAAARELG STQPAVSQQV FQLEAELGVP LFERSPRGVT LTSDGQCLYE AVRVSLDTLR GATATLRARR EHGALTIVTD FGFATYWLMP RLAGLKHVMP DVDVRVVTSQ DYDAQRDHAD IAILFGDGHW PSCTAARLFP ESVTPVCSPG FRAAHPDVAR PDHLHALPLL HVQPTRPERW LSWAGWFDAH GLDAPAAARG VTFNSYALVI HAALLGEGVA LGWSPLVDEL VASGQLVKLV DAPVVTSRGY FLVRPPQRPE PDATHVFRRW LLDACA
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