| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5008 |
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| Symbol | |
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| ID | 6179724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2165340 |
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| End bp | 2166308 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684760 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001811670 |
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| Protein GI | 172064019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGC AATCCCATGC AGCAATCCGC GGGCTCGGCA CGGCACTCGC CGCGGCCGCA
TGCGTACTGG CGACGCAGCC CGCGAACGCG GCCGATCCGC AGACGTGTCG CGACGTGAAG
ATGGCGGCGC CCGGCTGGAC GGACATCGAC GCGACGAACG CGATGGCCGG CGTCGTGCTG
AAGGCGCTCG GCTACCGGCA GGACGTCGCG AACCTGTCGG TGCCGATCAC GTACCAGGGC
TTGAAGAAAG GGCAGGTCGA CGTGTTCCTC GGCAACTGGA TGCCCGCGCA GGCGCCGCTC
GTGAAGCCGT TCGTCGACGA GAAGTCGATC GACGTGCTGC ACGCGAACCT GAGTGGCGCG
AAGTTCACGC TGGCCGTGCC CGACTACGTC GCGGCCGCGG GCGTGCACAC GTTCGCCGAT
CTCGCGCGCT ATGCCGACCG CTTCGGCGAC AAGATCTACG GGATCGAGCC CGGCGCGCCT
GCGAACCAGA ACATCAAGCG GATGCTGTCC GACCATGCGC TCGGCCCGGC GAACTGGTCG
CTCGTCGAAT CGAGCGAGAC GGGGATGCTC ACGCAGGTCG AGCGGGCGGT GCGCGACAAG
CGCTGGATCG TCTTTTTGGC CTGGGAGCCG CACCTAATGA ACACCAAGTT CCACCTGACC
TACCTGTCGG GCGGCGATGC GTATTTCGGT CCGAACTACG GCGGTGCGAC GGTCAACACG
GTGACGCGTC CGGGCTTTGC CGGCCAGTGC GCGAACCTCG CGCGCCTGTT CCGGCAGATG
ACGTTCTCCG TCGACGTCGA GAACCGGATC ATCGCCGACA TGCTCGACCA CAAGACCTCG
CCCGCGCTCG CGGCGCAGCA CGTGCTGAAG GCCGACCCGG CGCTCGTCGA GGGCTGGCTG
GACGGCGTGA CGACCGCATC CGGCACACCG GCCCTGCCGG CCGTGCGCGC GGCGCTCGAC
GCCCGCTGA
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| Protein sequence | MKRQSHAAIR GLGTALAAAA CVLATQPANA ADPQTCRDVK MAAPGWTDID ATNAMAGVVL
KALGYRQDVA NLSVPITYQG LKKGQVDVFL GNWMPAQAPL VKPFVDEKSI DVLHANLSGA
KFTLAVPDYV AAAGVHTFAD LARYADRFGD KIYGIEPGAP ANQNIKRMLS DHALGPANWS
LVESSETGML TQVERAVRDK RWIVFLAWEP HLMNTKFHLT YLSGGDAYFG PNYGGATVNT
VTRPGFAGQC ANLARLFRQM TFSVDVENRI IADMLDHKTS PALAAQHVLK ADPALVEGWL
DGVTTASGTP ALPAVRAALD AR
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