Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5006 |
Symbol | |
ID | 6179896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2162469 |
End bp | 2163719 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641684758 |
Product | major facilitator transporter |
Protein accession | YP_001811668 |
Protein GI | 172064017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.641572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CGTTACCCGA ATCCAGCACC GCATCCACGT TACCCGCCAA CCTGTTTCGC CACGCACCGT TCCAGCGCTT CTGGGGCACG CGCGTGATGT CGTCGCTGGC GTTCCAGATC CTGTCGGTCG CGATCGGCTG GTATGTCTAT ACGCTCACGC ACAGCGCGTT CGCGCTCGGC CTCGTCGGCC TCGCGCAGTT CGTGCCGATG TTCGCGCTGA CGCTCGTCGT CGGGCAGGTG GCCGACCGCT ACGACCGCCG ACGCATCGCG ACGATCTGCC AGAGCGTCGA GGCGCTGGCC GCCGGCGTGT TCCTGTTCGG CGCGGCGAAA GGCGGGCTCA CCGAGCCGGC CGTGTATGCG CTCGCGGCGA TCGTCGGCAC CGCGCGTGCG TTCGAATCGC CGTCGGTGTC GTCGTTGCTG CCGGCCGTCG TGCCGCGCAG CGACCTGCCG CGCGCGACCG CGCTGTCGAC GTCCGCGAAC CAGGCCGCGC AGATTCTCGG GCCCGCGTTC GGCGGGCTGC TGTATGGCAT CGGTGCGCCC GCCGCGTTCG GCACGAGCGT GGTCGCATTC GCGATCGCGG CGGTGCTGAG CGGCACGATT CCGCTGCGCA GCGCGCCGCC GGCACGCGAG CCGGTCACGC TGCGTTCGGT GTTCTCGGGC ATCGCGTTCA TCCGGCGCGA ACCGGCGATC CTCGGCGCGC TGTCGCTCGA CCTGTTCGCG GTGCTGTTCG GGGGTGCCAC CGCGCTCCTG CCGATCTACG CACGCGACAT CCTGCAGGTC GGACCGTGGG GGCTCGGCGC GTTGCGCGCG GCGCCGGCGG TCGGTGCGCT CGCGGGGACG CTGTGGCTCA CGCGTTTTCC GCTGAAGGGG CGGCCGGGCC GCGCGATGTT CGGCGGCGTG ATCGCATTCG GCATCGCGAC GATCGTGTTC GGGCTGTCGA GGCATTTCGC GGTGTCGCTC ATCGCGCTGG CGGCGTTGGG CGCGTCGGAC GTGGTGAGCG TCGTCGTGCG CCTGTCGCTC GTGCAGCTGC GTACGCCCGA CGACATGCTC GGGCGCGTGA GCGCGGTCAA CTCGTTGTTC ATCGGCACGT CGAACCAGCT CGGCGAATTC GAATCGGGCG TGACGGCTGC ATGGTGGGGC GCGCCGGCGG CGATCGTGGT CGGCGGCGCG GCGACGATCG CCGTGGCGCT CACGTGGATG CGCCTGTTTC CGACGTTGCG GAACATGAGA TCGCTGGAGC GCGATCATTG A
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Protein sequence | MTTPLPESST ASTLPANLFR HAPFQRFWGT RVMSSLAFQI LSVAIGWYVY TLTHSAFALG LVGLAQFVPM FALTLVVGQV ADRYDRRRIA TICQSVEALA AGVFLFGAAK GGLTEPAVYA LAAIVGTARA FESPSVSSLL PAVVPRSDLP RATALSTSAN QAAQILGPAF GGLLYGIGAP AAFGTSVVAF AIAAVLSGTI PLRSAPPARE PVTLRSVFSG IAFIRREPAI LGALSLDLFA VLFGGATALL PIYARDILQV GPWGLGALRA APAVGALAGT LWLTRFPLKG RPGRAMFGGV IAFGIATIVF GLSRHFAVSL IALAALGASD VVSVVVRLSL VQLRTPDDML GRVSAVNSLF IGTSNQLGEF ESGVTAAWWG APAAIVVGGA ATIAVALTWM RLFPTLRNMR SLERDH
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