Gene BamMC406_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4875 
Symbol 
ID6179361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2012676 
End bp2013122 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID641684628 
ProductMarR family transcriptional regulator 
Protein accessionYP_001811539 
Protein GI172063888 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000623298 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000014051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAAAC CCGCCAAGTT GACCGCCGTC GCGCTGTCCG TGTTCCGGCT GAACGGCCTG 
CTGATCGAAT GGGGCAATGC CTTTGCCGCG CCGCACGGCC TGACCAGCGC GCGCTGGCAA
GTGCTGGGCG CCATCTCGAT GGCGCCGGAC GCCCCCAACA TCCCGCAGAT CGCCGACGCG
ATGGGCATCA CGCGGCAGGC CGTGCTGAAG CAGGTCAACG TGCTGACCGA AGAAGGACTC
GTGCAACCGC TGCCGAACCC GACGCACAAG CGCTCGCCGC TGTATGCGCT GACCCCGCGC
GGTGCCGCGG CCTATCAGGC GGTGGTCGAG CACTGGCAAC AGCATGTCCG CGGCCTCGCC
GGCCAGTTCA GTTCGACGGA TCTCGATGCG GCGATTCGCG TTCTGTCGAC GATGTCCGCC
GCTCATGCGC CCGATGGGCA TGCGTGA
 
Protein sequence
MTKPAKLTAV ALSVFRLNGL LIEWGNAFAA PHGLTSARWQ VLGAISMAPD APNIPQIADA 
MGITRQAVLK QVNVLTEEGL VQPLPNPTHK RSPLYALTPR GAAAYQAVVE HWQQHVRGLA
GQFSSTDLDA AIRVLSTMSA AHAPDGHA