Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4681 |
Symbol | |
ID | 6181057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1799114 |
End bp | 1799983 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684440 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001811351 |
Protein GI | 172063700 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.205446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC TCGGTCGCAG CCTGCCGTTC GTCGCGCTGT TCGGCCCGGC GCTGCTGGTG CTGGCCGCGC TCGCGCTGTA CCCGGTCGCG CAGGTGCTGG TCGACTCGTT CTGCCAGGTC GACTATGCGG CCGGCCGGCG CACGTTCGCC GGGCTCGCGA ACTATCGCGC GGTGCTCGGT GACGATGCGT TCACAGCCGG CTTCGGCAAC ACGCTGCGCT TCACGATCGT GGCCTCGCTC GCCGAAGTCG TGCTCGGCTT CGGTCTCGCG CTGCTGTTCG TGCGCGCGTT TCCGGGGCGG CGCATCGCGC TGCCGCTCGC GATCCTGCCG ATGATGCTGT CCACGCTCGT GTGCTCGGCG ATCTGGCGCA ACTGGCTCAA CTTCGACGGC TTCCTGAACG CGCTGCTCGC CGCGTTCGGC ATCGAAGGCG TGCGCTGGCT GTCCGATCCG CATCTCGCGC TGTGGTCGCT CGTGCTCGTC GACGTGTGGC AGTGGACGCC GATGGCGTTC CTGATCGTGC TTGCCGGGCT GCAATCGATC CCGCAGGAAC TGTACGAAGC CGCGCGCACC GACGGCGCGA GCGAATGGCA GTGCCTGCGC GACATCACGC TGCCGCTTGC GGCGCCGCAG ATTGGTCTCG CGCTGCTGCT GCGCTCGATC GACACGTTCA AGCTGTTCGA CAAGGTCTAT GCGCTGACGG GCGGCGGCCC CGGCAATGCG ACGCAGACGC TGTCGACCTA TATCTACGAC ACGGGCTTCC GCTTCTTCAA CGTCGGACCG GCGAGTGCCG CGTCGGTGCT GATGCTCGCG GCGTCCGCGC TGCTGGTCTC GGGGTATGTA TGGCAGACGG TTCGCAAGCG GCGCGCATGA
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Protein sequence | MKALGRSLPF VALFGPALLV LAALALYPVA QVLVDSFCQV DYAAGRRTFA GLANYRAVLG DDAFTAGFGN TLRFTIVASL AEVVLGFGLA LLFVRAFPGR RIALPLAILP MMLSTLVCSA IWRNWLNFDG FLNALLAAFG IEGVRWLSDP HLALWSLVLV DVWQWTPMAF LIVLAGLQSI PQELYEAART DGASEWQCLR DITLPLAAPQ IGLALLLRSI DTFKLFDKVY ALTGGGPGNA TQTLSTYIYD TGFRFFNVGP ASAASVLMLA ASALLVSGYV WQTVRKRRA
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