Gene BamMC406_4681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4681 
Symbol 
ID6181057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1799114 
End bp1799983 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID641684440 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001811351 
Protein GI172063700 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.205446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TCGGTCGCAG CCTGCCGTTC GTCGCGCTGT TCGGCCCGGC GCTGCTGGTG 
CTGGCCGCGC TCGCGCTGTA CCCGGTCGCG CAGGTGCTGG TCGACTCGTT CTGCCAGGTC
GACTATGCGG CCGGCCGGCG CACGTTCGCC GGGCTCGCGA ACTATCGCGC GGTGCTCGGT
GACGATGCGT TCACAGCCGG CTTCGGCAAC ACGCTGCGCT TCACGATCGT GGCCTCGCTC
GCCGAAGTCG TGCTCGGCTT CGGTCTCGCG CTGCTGTTCG TGCGCGCGTT TCCGGGGCGG
CGCATCGCGC TGCCGCTCGC GATCCTGCCG ATGATGCTGT CCACGCTCGT GTGCTCGGCG
ATCTGGCGCA ACTGGCTCAA CTTCGACGGC TTCCTGAACG CGCTGCTCGC CGCGTTCGGC
ATCGAAGGCG TGCGCTGGCT GTCCGATCCG CATCTCGCGC TGTGGTCGCT CGTGCTCGTC
GACGTGTGGC AGTGGACGCC GATGGCGTTC CTGATCGTGC TTGCCGGGCT GCAATCGATC
CCGCAGGAAC TGTACGAAGC CGCGCGCACC GACGGCGCGA GCGAATGGCA GTGCCTGCGC
GACATCACGC TGCCGCTTGC GGCGCCGCAG ATTGGTCTCG CGCTGCTGCT GCGCTCGATC
GACACGTTCA AGCTGTTCGA CAAGGTCTAT GCGCTGACGG GCGGCGGCCC CGGCAATGCG
ACGCAGACGC TGTCGACCTA TATCTACGAC ACGGGCTTCC GCTTCTTCAA CGTCGGACCG
GCGAGTGCCG CGTCGGTGCT GATGCTCGCG GCGTCCGCGC TGCTGGTCTC GGGGTATGTA
TGGCAGACGG TTCGCAAGCG GCGCGCATGA
 
Protein sequence
MKALGRSLPF VALFGPALLV LAALALYPVA QVLVDSFCQV DYAAGRRTFA GLANYRAVLG 
DDAFTAGFGN TLRFTIVASL AEVVLGFGLA LLFVRAFPGR RIALPLAILP MMLSTLVCSA
IWRNWLNFDG FLNALLAAFG IEGVRWLSDP HLALWSLVLV DVWQWTPMAF LIVLAGLQSI
PQELYEAART DGASEWQCLR DITLPLAAPQ IGLALLLRSI DTFKLFDKVY ALTGGGPGNA
TQTLSTYIYD TGFRFFNVGP ASAASVLMLA ASALLVSGYV WQTVRKRRA