| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4661 |
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| Symbol | |
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| ID | 6180846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1776827 |
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| End bp | 1777582 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684420 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811331 |
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| Protein GI | 172063680 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG ACACCGACAG TTTTCGCGAC AACCTTTTTG CAGGACGGCA CGTGCTCGTT
TCCGGCGCGA CGAGCGGCAT CGGGCTTGCC ATCGCGCGGG CGTTCCACCG ACTCGGCGCG
CATACCATCG CCACGGGCTC GTCCGCAACG AAGCTCGACG CGCTACGCAA CGAGGCGTCG
CTGACCGGCC TGCGTTTTGC CGCGCTGGAC GTGCGCAACC ATGGCGAAAT CGACGCATTC
TTCGGCAGCC TCGGACGCCT TGACGTGCTC GTCAATGCGG CGGGCGTCGC TCGCCCGCGC
GACGAATACG CGGACGATGT GTTCGGCGAT GTACTCGACG TCAACCTGCG TAGCGTAATG
CGCCTGTCGC AGGCCGCACG CCCGCTCCTC GAACAGTCGC GCGGCTCGAT CGTCAATATC
GCGTCCATGC TCAGCTACCT CGCCGACGCC GATGTACCGG CCTACTGCGC CAGCAAGACC
GGCGTGGTCG GTCTGACTCG CTCGCTGGCC CATGAATACG GGCCGCGCCG CGTGCGCGTG
AATGCGATCG CTCCCGGTTA TCACCGAACC GACATGACGC GGATATTCTG GGAATCGGAA
GAGTTGTCGC GCAAGATCGT GTCGCGTTCC GCTCTCGGTC GCTGGGGCGA AGCAGGGGAT
CTCGCGGGCG CAGCGGTGTT TCTCGCGTCG CCCGCCGCGG CCTTCGTGAC CGGCGTGACA
CTGCCCGTCG ACGGAGGATA TGTGTCCGGC TTCTAG
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| Protein sequence | MSFDTDSFRD NLFAGRHVLV SGATSGIGLA IARAFHRLGA HTIATGSSAT KLDALRNEAS
LTGLRFAALD VRNHGEIDAF FGSLGRLDVL VNAAGVARPR DEYADDVFGD VLDVNLRSVM
RLSQAARPLL EQSRGSIVNI ASMLSYLADA DVPAYCASKT GVVGLTRSLA HEYGPRRVRV
NAIAPGYHRT DMTRIFWESE ELSRKIVSRS ALGRWGEAGD LAGAAVFLAS PAAAFVTGVT
LPVDGGYVSG F
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