| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4644 |
|---|
| Symbol | |
|---|
| ID | 6180688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1757159 |
|---|
| End bp | 1757695 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641684403 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_001811314 |
|---|
| Protein GI | 172063663 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCC AGAACCCGAG CTTTTCCGTG CCGGCCCGTG TCCTGCACTG GCTGATGGCC
GTGCTGATCA TTGCAATGCT GTTCGTCGGA GCAGGCATGG TATCGACAGT CAGCGCGCGA
TATCCGCAAT TGCTGGCGCT GCATCGGCCG CTTGGCATCG CGATCCTGCT GCTGGCGCTG
ATCCGGCTTG GCGTGCGTGT GACGCACCGG CCGCCGCCTT TGCCGCCGGG CATTCCGCCG
TTGCAGGCTA CTGTCGCGAA GCTATCGCAT TACCTGCTTT ACGGCTTGAT GATTGCCATG
CCGCTGATCG GTTGGGCGAT GCAGTCCGCC GGCGGCTATC CGATCTCGAT GTGGAAAGGT
GTCGAGCTGT TTCCGATCTT GCCGCACGAC ATCGTCGTCT ACGGTCAGCT GCGCCGCTTG
CACGGGCTGC TCGCTTATGC ATTTTTCCTG TTGATCGTCG GCCATCTCGC TGCTGCGCTC
TTGCACGCAT GGATCCGGCG CGACGGCGTC TTCGAGAGCA TGGCCGGCGG CCGATAG
|
|---|
| Protein sequence | MTSQNPSFSV PARVLHWLMA VLIIAMLFVG AGMVSTVSAR YPQLLALHRP LGIAILLLAL
IRLGVRVTHR PPPLPPGIPP LQATVAKLSH YLLYGLMIAM PLIGWAMQSA GGYPISMWKG
VELFPILPHD IVVYGQLRRL HGLLAYAFFL LIVGHLAAAL LHAWIRRDGV FESMAGGR
|
|---|
| |