| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4583 |
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| Symbol | |
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| ID | 6179647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1689943 |
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| End bp | 1690551 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684344 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001811255 |
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| Protein GI | 172063604 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000141788 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000655879 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAACCT TCGTTCACGA GGAAGGGCGG TTGCCGCACG AACTTGCAGC GGATCTAGGG
CGCTATCGGC GCCGTGTATT CGTCGAACAG CTCGGTTGGG CGCTTCCGTC GGCGAACGAG
AGTTTCGAGC GCGATCAGTT CGATCGCGAC GATACCGTCT ACGTGTTTGC GAGAAACGCC
GGCGGCGACG TGTGCGGATG TGCACGCCTG TTGCCGACCA CCCGCCCGTA TCTGCTGAAG
TCGCTGTTCG CCGACCTGGT CGCCGAAGAC GTCCCGCTGC CGCAATCGGC TGCCGTCTGG
GAGCTGTCAC GGTTCGCGGC GTCCGGCGAC GAAGGCGGTC CGGGCAATGC CGAGTGGGCC
GTCCGCCCGA TGCTCGCGGC GGTCGTCGAA TGCGCGGCGC AGCTGGGCGC GCGGCAGCTG
ATCGGCGTGA CGTTCGCGAG CATGGAGCGG CTGTTCCGCC GCATCGGCGT GCACGCGCAC
CGGGCAGGGC CGCCGAAGCA GGTGGACGGT CGTCTGGTTG TCGCGTGCTG GATCGACATC
GATCCGCAAA CGTTTGCTGC ACTTGGAATC GAGCCGGGAC GGGCCGCCCG GCAAGCCATC
GCCGCCTGA
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| Protein sequence | MRTFVHEEGR LPHELAADLG RYRRRVFVEQ LGWALPSANE SFERDQFDRD DTVYVFARNA
GGDVCGCARL LPTTRPYLLK SLFADLVAED VPLPQSAAVW ELSRFAASGD EGGPGNAEWA
VRPMLAAVVE CAAQLGARQL IGVTFASMER LFRRIGVHAH RAGPPKQVDG RLVVACWIDI
DPQTFAALGI EPGRAARQAI AA
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