Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4495 |
Symbol | |
ID | 6181095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1595590 |
End bp | 1596744 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684256 |
Product | porin |
Protein accession | YP_001811167 |
Protein GI | 172063516 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC ACGTCATTTT TGCCGCCGCG CTGGCAGCGT TCGCCGCGCC GGCCTTCGCG CAGGACAGCG TGACGCTGTA CGGCCTGATC GACGAAGGCT TCAACTACAC GAACAACGTG AATGTGCATG GAGTCGGAAA AACGGATTAC CAGCTGGCGA GCGGCTATGC GCAGGGCAGC CGCTGGGGCC TGAAGGGCAG CGAGGAACTG GGCGGCGGCC TGAAGGCGAT CTTCACGCTG GAAAACGGCT TCGACGTGAA CAACGGCCGG TTCAACCAGG GCGGCCGGAT GTTCGGCCGC CAGGCGTTCG TCGGGCTGAG CGCGTCGCGT TTCGGCACGC TCACCTTCGG CCGCCAGTAC GATTCCGTCG TCGACTATCT CGCGCCGCTG ACCGCGAACG GCAACTGGGG CGGCACGCTG TTCTCGCACC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTCAA CAACACGGTC AAGTACGCGA GCCCCGACTG GAACGGGCTG TCGTTCGGCG GCACCTACAG CTTCAGCAAC AGCACGGGCT TCGCGACCAA CCGCCAGTAC AGCCTCGGCG CGCAGTACTC GCTCGCCGGG CTGCAGGTCG CGGCCGCGTA TCTGCAGGCG AACAGCCCGG GCGTCGGCAA CGCGGGCGCG ATCGCGGCCG ACGACGCGAA TTTCGTCGCC GACCGCCTGC GCATCTTCGG CGGCGGCATC AACTATACGT TCGGCCCGGC GACGGTCGGC TTCGTCTATA CGAAGACCGA CGTGAAGAAC CCGGTGTCGA CCGTCTACCT GCCGGCGTCG ACGTTCTCGG GCCTCGGGCT GACCGCAACG AAGTTCCAGA ACTTCGAGAT CAACGGCAAG TACCAGCTCA CGTCCGATTT CTATCTCGGC GCGCAGTACG TGTACACGGA CGGCAAGTTC GACGCCGCGA CCGGCTCGTT CAAGCCGAAA TACCATACCG TCGGGCTGAT GGCCGACTAC AGCCTGTCCA AGCGTACCGA CGTCTATCTG CAGGGCGCAT GGCAGAAAGT CGCCGGCGAC AAGACGGGCA CCGCGGCCGA CGGCGGCTAC GTGGTCGGGA CGGACGGCCC GTCGTCGTCG TCGAACCAGT TCGCGGTGCG CGCCGCGATC CGCCACAAGT TCTGA
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Protein sequence | MKKHVIFAAA LAAFAAPAFA QDSVTLYGLI DEGFNYTNNV NVHGVGKTDY QLASGYAQGS RWGLKGSEEL GGGLKAIFTL ENGFDVNNGR FNQGGRMFGR QAFVGLSASR FGTLTFGRQY DSVVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASPDWNGL SFGGTYSFSN STGFATNRQY SLGAQYSLAG LQVAAAYLQA NSPGVGNAGA IAADDANFVA DRLRIFGGGI NYTFGPATVG FVYTKTDVKN PVSTVYLPAS TFSGLGLTAT KFQNFEINGK YQLTSDFYLG AQYVYTDGKF DAATGSFKPK YHTVGLMADY SLSKRTDVYL QGAWQKVAGD KTGTAADGGY VVGTDGPSSS SNQFAVRAAI RHKF
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