| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4467 |
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| Symbol | |
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| ID | 6179915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1563823 |
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| End bp | 1565244 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684228 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811139 |
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| Protein GI | 172063488 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.652401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGTT ACGAACAACT GGCCGACGAG CTGCAGACGC AGATCGAGCG CGGCGTATAC
CGGCCGGGCG AGCGGATTCC GTCGGTGCGG CAGGCGAGCA GGCAGCAGCA GCTCAGCGTG
ACGACCGTGC TGCGCGCGTA TCTCGTGCTG GAGAGCCGCG GCCTGATCGA GAGCCGGCCG
CAGTCGGGTT ATTTCGTGCG GGCGCGGGTC ACGGAGCCGG CCGAGGCCGA GCTGCACACC
TCGGCGCCGG CGGCCGAGCC GTCGGCGGTG GACGTGAGCC GGCTCGTGCT GTCGACGCTG
CGCTCGATCG CGCGTGACGA CGCGGTGCCG CTCGGCTCGC CGTATCCCGA CGCGTCGCAG
TTCCCGGTGC AGCGTCTTGC GCGCTACGCG CAGGCGATCG GACGGCGCCG CACGCGCTGG
GGCGTGATCG ACGACCTGCC GCCCGGCAAC CAGGAACTGA TCCGCCAGAT CGCGCGGCGC
TACGCGGAGC GCGGGATCGC GGTCGAGCCC GCCGAGATCG TGATGACGAT CGGCGCGACC
GAGGCGATCA ACCTGTGCCT GCAGGCTGTC GCGCGGCCGG GCGATACGAT CGCCGTCGAG
TCGCCGACGT TCTACGCGAT GCTGCACGCG ATCGAGCGGA TGGGCATGCG CGCGCTCGAG
GTGGCGACGC ATCCGGGCGA CGGCATCGAT CTCGACGCGC TCGAACGGAT CCTCGAGCGC
GAGCGCATCG CCGCGTGCAT GGTGATGCCG AATTTCCAGA ATCCGCTCGG CTTTCAGATG
CCCGATGCGC GCAAGCGCGC GCTCGTCGAG TTGCTCGCGA AGCACGGCGT GCCCGCGATC
GAGAACGACG TCTACCACGA GCTGCATTTC GGCGACACGA CGCCGAGCGC GCTGAAGTCG
TACGATCGCG ACGGGCTCGT GCTGCATTGC GCGTCGTTCA CGAAGAGCCT GTCGCCGCGC
TACCGGATTG GTTGGGCGAT GCCGGGCCGC TATCGCGACC AGGTCGAGAA GCTGAAATTC
CTGAATACGC TCGCGACGCC CGCGATCGAG CAGCTCGCGA TCGCCGAATA CCTGAAGCAC
GACGGCTACG ATTTCCACCT GCGGCGGATG CGCAAGCAGT ATGCGCAGCA GGCGAGCCTG
ATGAGCGCGA TGGTGCGGCG TTTCTTCCCG GCGGGCACGC GGCTGTCGCA GCCGCAGGGC
GGGTACGTGC TGTGGGTCGA GTTGCCGCCG CGGGTCGACG CGATGAAGCT GTATGCGCTC
GCGCTCGCGC AGGGCATCAC GATCGGGCCC GGCCATATGT TCTCGGCGAG CGCCGATTAC
CGGCATTTCA TCCGGCTCAA CTACAGCTAT CCGTGGTCGC GGCAGATCGA GGACGCGCTG
AAGGTGGTGG GGCGGCTCGC GTCCGAGTGC GCGGCGCGGT GA
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| Protein sequence | MKRYEQLADE LQTQIERGVY RPGERIPSVR QASRQQQLSV TTVLRAYLVL ESRGLIESRP
QSGYFVRARV TEPAEAELHT SAPAAEPSAV DVSRLVLSTL RSIARDDAVP LGSPYPDASQ
FPVQRLARYA QAIGRRRTRW GVIDDLPPGN QELIRQIARR YAERGIAVEP AEIVMTIGAT
EAINLCLQAV ARPGDTIAVE SPTFYAMLHA IERMGMRALE VATHPGDGID LDALERILER
ERIAACMVMP NFQNPLGFQM PDARKRALVE LLAKHGVPAI ENDVYHELHF GDTTPSALKS
YDRDGLVLHC ASFTKSLSPR YRIGWAMPGR YRDQVEKLKF LNTLATPAIE QLAIAEYLKH
DGYDFHLRRM RKQYAQQASL MSAMVRRFFP AGTRLSQPQG GYVLWVELPP RVDAMKLYAL
ALAQGITIGP GHMFSASADY RHFIRLNYSY PWSRQIEDAL KVVGRLASEC AAR
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