| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4439 |
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| Symbol | |
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| ID | 6181330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1525825 |
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| End bp | 1526934 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684200 |
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| Product | porin |
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| Protein accession | YP_001811111 |
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| Protein GI | 172063460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.989602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC GACACAAACA TCTAGGATGG CTGATCGCGG CCGCCGCACC GGTGGCCGCA
TTCGCACAAA CCAGCGTGAC GCTGTATGGC CGTATCGACG GCGGCGTCGA ATACCTGAAC
CACATCGCGA CGCCGAACGG CAGCTCGACG CGCTGGAGCG CGGAAGGCGG CGACTGGGGC
ACCAGCATGT TCGGGCTGAA GGGTTTCGAG GATCTCGGCG GCGGGATGTC GACGGTCTTC
AACCTGGAAA CCGCGTTCCA GGTGATGAAC GGCACGACGG GTGGTGGACG CCTGTGGTCG
CGCCGCGCGT ATGTCGGGCT GAAGAGCGAC ACGTGGGGTC AGCTGCAGGC CGGCCGCAAC
CTGTTCATCG ACAGCGACGG CGTGTGGGAA TTCGACCCGT TCGTGCAGCA GGCGTTTTCG
TCCGCGTCGC TCGTGCGCGG GCGCAACTGG CAGCAGAGCA GCAACAACAT CGAATATCAC
AGCCCGGTGA TCGGCGGCTT CGACGTGCAG GCGCAGTATG CGTTCGGCAA CCAGTCGCGC
GGCTTCAACT ACGGCGCGGC CGACGACTTC GGCCGCTCGG ACGGGATCAT GATCTCGTAC
CATTCGCCGG TGCTCGACGT GCGCGGCATC TACGACGAGC TGCGCGACAA CAACGGCAAG
TTCAGCAACA TCTTCACCGC GTCGCGCGAG TATTTCGTCG GCGCGAACGT GAAGGTGTCG
AAGTTCAAGA TCCAGGGCGC GTATACGCAT TACCAGGCGC CGGACAGCCC GGCTGGCGTT
GCCGATCGTG CCGATCATTA CTGGCTCGGT GCGACTTATA CGGCGACGCC GCAGTGGGCC
GTGACGGGCG GCGGGTATTA CGTGAAGGTG GGCGATGGCG GCGGCGATGC GTCGCACGAT
CCGTCAGGCC ACGCGATCAT GTATGTGCTC GGCACCACGT ACAACTTGTC GAAGCGGACG
TTCCTGTATG GGACGGTTGC GTATGTGCGG AATGGCGGGA ATTCGAACTT CTCGCTGATT
GCGTCGCCGC GCGATGCGAC GTCGGGGACG AGTCCGATGA CCGGTGAGTC GCAGACGGGG
GCGTATGTGG GGATGATGCA TACGTTCTGA
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| Protein sequence | MTLRHKHLGW LIAAAAPVAA FAQTSVTLYG RIDGGVEYLN HIATPNGSST RWSAEGGDWG
TSMFGLKGFE DLGGGMSTVF NLETAFQVMN GTTGGGRLWS RRAYVGLKSD TWGQLQAGRN
LFIDSDGVWE FDPFVQQAFS SASLVRGRNW QQSSNNIEYH SPVIGGFDVQ AQYAFGNQSR
GFNYGAADDF GRSDGIMISY HSPVLDVRGI YDELRDNNGK FSNIFTASRE YFVGANVKVS
KFKIQGAYTH YQAPDSPAGV ADRADHYWLG ATYTATPQWA VTGGGYYVKV GDGGGDASHD
PSGHAIMYVL GTTYNLSKRT FLYGTVAYVR NGGNSNFSLI ASPRDATSGT SPMTGESQTG
AYVGMMHTF
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