| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4424 |
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| Symbol | |
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| ID | 6181140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1509155 |
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| End bp | 1510243 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684185 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001811096 |
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| Protein GI | 172063445 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.612228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT CGTCCAACCA GCTCCCGCGC TGGACCCTCT GGGCCCCGCT TGCCGCGTGG
CTGGTACTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCC TCGTCATCGC AGTGTTGGCC
GCCGCGCTCG CCGGCGCCGT GTTCGCCGCC GTCCACCACG CCGAAGTCGT CGCGCACCGC
GTCGGCGAGC CGTTCGGCAC GCTGGTGCTC GCGGTCGCCG TGACCGTCAT CGAAGTCGCA
CTGATCGTGT CGGTGATGCT CGGCGCCGGT CCCGAGAAAT CGGGCCTCGC GCGCGACACC
GTGTTCGCCG CGGTGATGAT CATCTGCAAC GGCATCGTCG GCCTCTGCCT GCTGGTCGGT
GCTTGGAAGC ACGGCGAACA GGACTTCCAG GGGCGCGGGG CGAGCAAGGC GCTCGCGGTG
CTCGCGTCGC TGTCGGTGCT GTCGCTCGTG ATGCCGAACT ACCTGAACGC CGCGCCCGGT
CCGTTCTTTT CGAAATCGCA GCTGGCGTTC GCCGGCGTGT CGTCGCTCGT GCTGTACGGC
GCATTCGTAT TCGTGCAGAC CGTGCGTCAC CGCGACTACT TCCTCACCGC GCACGACAGT
GCGAACGAAT CGGTGCATGC CGCGCCGCCG ACCGGCCGCA CCGCGGTGAT CAGCCTCGTG
CTGCTGTTCG CGAGCCTCGT CGCGGTCGTG CTGCTCGCGA AGCTGCTGTC GCCGGCCGTC
GAGCATGCGG TAATGAAGCT CGGCGCGCCC GAAGCGGCGG TCGGCATCGT GATCGCCGCG
CTCGTGCTGC TGCCCGAAGG GCTCGCGGCC GTCACCGCCG CGCGCGCGAA CCGCCTGCAG
ACCAGCATGA ATCTCGCGCT CGGTTCGGCG CTCGCGAGCA TCGGACTCAC GATCCCGACC
GTCGCGGCCG TGTTCATCTG GGTCGGCCAG CCGCTCACGC TCGGCATCGG CGCGATGGAA
ACCGTGCTGC TGGCGCTCAC GCTGCTCGTC AGCACGCTGA CGCTCAGCCA GGGGCGCACG
ACGGTGCTGC ACGGTGTCGT GCACCTGTCG CTGTTCGCGG CCTATCTGTT CCTGTCGATC
ACTCACTGA
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| Protein sequence | MPISSNQLPR WTLWAPLAAW LVLALSRVVP AEGLVIAVLA AALAGAVFAA VHHAEVVAHR
VGEPFGTLVL AVAVTVIEVA LIVSVMLGAG PEKSGLARDT VFAAVMIICN GIVGLCLLVG
AWKHGEQDFQ GRGASKALAV LASLSVLSLV MPNYLNAAPG PFFSKSQLAF AGVSSLVLYG
AFVFVQTVRH RDYFLTAHDS ANESVHAAPP TGRTAVISLV LLFASLVAVV LLAKLLSPAV
EHAVMKLGAP EAAVGIVIAA LVLLPEGLAA VTAARANRLQ TSMNLALGSA LASIGLTIPT
VAAVFIWVGQ PLTLGIGAME TVLLALTLLV STLTLSQGRT TVLHGVVHLS LFAAYLFLSI
TH
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