Gene BamMC406_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4408 
Symbol 
ID6180760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1489399 
End bp1490097 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID641684169 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001811080 
Protein GI172063429 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.212446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT ACGTCATCGA CGCTTCCGAG CGTCCTTCCG TCGAAGTCGA CCAGTCGTCC 
GCGCGCTTTC CGGTGCGCCG CGTGTTCTGC GTCGGCCGCA ACTACGCCGA TCACGCGCGC
GAAATGGGCG CCGATCCCGA CCGCGAACCG CCGTTCTTCT TCACGAAGCC GGCCGACGCG
ATCGTCCCGG CCGGCGGCAC CGTCCCGTAT CCGCCGCTGA CCAGCGACCT GCATCACGAA
ATCGAGCTGG TGGTCGCGAT CGGCAAGGAC GGCCGGTCGA TCGACCCGGC CGACGCGCTG
TCGCACGTGT GGGGCTACGG CGTCGGCGTC GACCTCACGC GCCGCGACCT GCAGGCCGAG
GCAAAGAAAC TGAGCCGGCC GTGGGACTGG GCGAAGGGCT TCGACGCGTC GGGCCCCGTG
ACCGCGCTGC GCTCGGCGAG CGTCACCGGC CATCCGGCGA GCGGGCGGAT CTGGCTCGCG
GTAAACGGCG AAACGCGCCA GCAAGGCGAT CTCGCCGACA TGATCTGGGC CGTGCCGGAC
GTGATCGCGT ACGTGTCGCG CTCGGTCGAG CTGAAGGCCG GCGACCTGAT CTTCACCGGC
ACGCCGGCCG GCGTCGGCGC ACTTCAGCCG GGCGATCGCA TGACGGGCGG CGTCGATGGG
GTGGCGACAT TCGAGTTCGT GATGGGAGCG AAGCCGTAA
 
Protein sequence
MSAYVIDASE RPSVEVDQSS ARFPVRRVFC VGRNYADHAR EMGADPDREP PFFFTKPADA 
IVPAGGTVPY PPLTSDLHHE IELVVAIGKD GRSIDPADAL SHVWGYGVGV DLTRRDLQAE
AKKLSRPWDW AKGFDASGPV TALRSASVTG HPASGRIWLA VNGETRQQGD LADMIWAVPD
VIAYVSRSVE LKAGDLIFTG TPAGVGALQP GDRMTGGVDG VATFEFVMGA KP