| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4334 |
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| Symbol | |
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| ID | 6181187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1414293 |
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| End bp | 1416260 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684101 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001811012 |
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| Protein GI | 172063361 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0530372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGA AATTCGACTA CGCAGGATTA CTGATCGCGG CGGGCTTCTT CGTGCTGTTT
GCCGCGCAGT TGCTGATGCT GCGGCCCGAG ACGACGATGA TCGCGTACAG CGATTTCCAT
CGGCTCGTCG ACGCCCGCCT CGTCGACGAT CTCGAGATCG GTTCGACGTC GATCGTGGGC
ACGCTGAAGA TGCCGCAGGC CGGCGCGATG CTGCCGGCCT CCGAAGTCGC GGCCGTGAAG
TCGGGCGGCA CGCCGCCGCG CTTCGCCACC AACCGCGTGA CCGACCCGCA GCTGATCGAC
GCGCTGAGCG CGGCCGGCAT CCGCTTTCAC GGCGCGTCCG ACACCGGCTG GATCACGTCG
CTCGCGTCGT GGCTGGTGCC GCTCGTCGCG TTCGTGTTCA TCTGGAACCT GATGCTGCGC
AGGCGCGGCG GGCTGCAGGA CTTCACCGGG ATGGGCAAGA GCCGCGCACG CGTGTACGTG
CAGCAGGAAA CCGGCATCAC GTTCGACGAC ATCGCGGGTA TCGACGAAGC GAAGGCCGAG
TTGCAGCAGC TCGTCGCGTT CCTGCGCAAC CCCGATCGCT ACCAGCGGCT CGGCGGCAAG
ATCCCGAAGG GCGTGCTCGT GGTCGGCGCG CCCGGCACCG GCAAGACGCT GCTCGCGCGC
GCGGTGGCCG GCGAGGCGGC CGTGCCGTTC TTCTCGATCA GCGGCTCGGC GTTCGTCGAG
ATGTTCGTCG GCGTGGGCGC CGCGCGCGTG CGCGACTTGT TCGAGCAGGC GCAGCAGAAG
GCGCCGTGCA TCGTGTTCGT CGACGAGCTC GATGCGCTCG GCAAGGTGCG CGGCGTCGGC
CCGATGTCAG GCAACGACGA GCGCGAGCAG ACGCTCAATC AGCTGCTCGT CGAGATGGAC
GGCTTCCAGG CCGGCACGGG CGTGATCATC ATGGCCGCGA CCAACCGGCC GGAGATTCTC
GATCCGGCGC TGCTGCGCCC GGGCCGCTTC GACCGCCACA TCGCGATCGA TCGGCCCGAC
GTGAACGGGC GTCGCCAGAT TCTCGGCGTG CACGTGAAGC GCGTGAAGCT CGCGGACGAA
GTCGACCTCG GCGAACTCGC GTCGCGCACA CCGGGTTTCG TCGGCGCCGA TCTCGCGAAC
GTCGTCAACG AGGCCGCGCT GCATGCGGCC GACCTCGGCA AGCCGGCGAT CGGGATGGAT
GACTTCGACG AAGCGATCGA TCGCGCGATG ACGGGCCTCG AGCGCAAGAG CCGCGTGATG
AACGCGCAGG AAAAGCTGAC GATCGCGTAT CACGAGGCGG GTCACGCGCT CGTCGCGGAA
AGCCGCGCGT ATTGCGACCC GGTGAAGAAG GTGTCGATCA TTCCGCGCGG CGTGGCCGCG
CTCGGCTATA CGCAGCAGGT GCCGACCGAG GATCGCTACG TTCTGCGGCG CAGCGAGCTG
CTCGATCGGA TCGATGCGCT GCTCGGCGGC CGCGTCGCGG AAGAACTCGT GTTCGGCGAC
GTGTCGACCG GTGCGCAGAA CGATCTCGAA CGCGCGACCG CGATGGCGCG CCACATGGTC
ATGCAGTACG GGATGAGCGA GAAGATCGGG CTGGTGAGCT TCGACGACGG CGAAGCGCGC
AGCGGCATAC CGGGTGCATG GCATGCGGGC GAGGGCCGCT GCAGCGAGCA CACCGCGCGC
GTGATCGACG ACGAGGTGCA TACGCTGCTG TCCGATGCGC ATGCGCGCGT CGCGGCGACG
CTCGGCGCAC GTCGCGACGC GCTCGAGCGG ATCGCGCGAC GGCTGCTCGA GTGCGAGGTG
CTCGAGCGCG ATGCGTTGCA GGCGCTGATC GACGGGCGCG AGGTGCCTGC GTCCGAGCCT
TCAATCATCG ATTGCGGTCC GTGCACGGGC GCGAATGCGC CGGGGCAGGC GTCGGCGGCC
GAGCACGATT TCGTCGCCTG CGGGCCGCCG CGCGAACCGG AGCGTTGA
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| Protein sequence | MDRKFDYAGL LIAAGFFVLF AAQLLMLRPE TTMIAYSDFH RLVDARLVDD LEIGSTSIVG
TLKMPQAGAM LPASEVAAVK SGGTPPRFAT NRVTDPQLID ALSAAGIRFH GASDTGWITS
LASWLVPLVA FVFIWNLMLR RRGGLQDFTG MGKSRARVYV QQETGITFDD IAGIDEAKAE
LQQLVAFLRN PDRYQRLGGK IPKGVLVVGA PGTGKTLLAR AVAGEAAVPF FSISGSAFVE
MFVGVGAARV RDLFEQAQQK APCIVFVDEL DALGKVRGVG PMSGNDEREQ TLNQLLVEMD
GFQAGTGVII MAATNRPEIL DPALLRPGRF DRHIAIDRPD VNGRRQILGV HVKRVKLADE
VDLGELASRT PGFVGADLAN VVNEAALHAA DLGKPAIGMD DFDEAIDRAM TGLERKSRVM
NAQEKLTIAY HEAGHALVAE SRAYCDPVKK VSIIPRGVAA LGYTQQVPTE DRYVLRRSEL
LDRIDALLGG RVAEELVFGD VSTGAQNDLE RATAMARHMV MQYGMSEKIG LVSFDDGEAR
SGIPGAWHAG EGRCSEHTAR VIDDEVHTLL SDAHARVAAT LGARRDALER IARRLLECEV
LERDALQALI DGREVPASEP SIIDCGPCTG ANAPGQASAA EHDFVACGPP REPER
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