Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4301 |
Symbol | |
ID | 6179907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1360434 |
End bp | 1362131 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684069 |
Product | peptidase M4 thermolysin |
Protein accession | YP_001810980 |
Protein GI | 172063329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3227] Zinc metalloprotease (elastase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT TGTCTCGTCT GCTGCCCATC GCCGCGATTA CCATTGCGAG TCTCAGCGCT TTTGCCCAGG CCGGCGACCC TTCGGCCACG GTCGACAAGG CGCTGCAACT GATCCAGCAG AATCCGTCCG CCTTCAGTCT GGCTACCGGC GGCACAGCAC GCACGTTGAA GTTCGCGGGG CCGCAAGCAA GCGCGCCGAC GGACGGAGAT CAGTTCCAGG TACGCGACGT GATCGTCGAT CCCGATGGCA CCGAGCACGT TCGCTTCGAT CGCTTCCATG CGGGCCTGCC GGTGATAGGC GGCGACGTCG TCGTCCATTC GCACCGAGGG CAGTTGAAGC AGGCGAGCCA GACCCAGCTC GCACCGATCA ATCTCGCCGG CACGATCGGC AAGGTCGGAA ACCGCTCAGT GGTACGCAAC GCGCCCGACG TAGGCGCGGC CAGGGCCAAG CTCATCGCGG CCGCGCGTTT CGACTCGAAC GTGCGTCGCG TCGATGACGC GGAACTCGTC GTATTCACAC GCGACGTCGC GCCGACACTG GCCTACGCGG TGCGCGTATA CGGCAACGCG ACCGATGCGC ACGGCGATGC CGTGCTGTAC TACATCGATG CGCGCACCGG CACCGTGCTC GACGCCCAGG ACCTGATCAA GACCGCCGCC GCGACCGGCA CCGGCCGCTC GCTGTACTAC GGCAACCTGG CGCTCACGAC GGACCAGACC GGCACGAACG CTTACCGGAT GCTCGATCCC AGCCGCGGCG GCGGCTCGGT CTACGATGGC CGCGGCCTGA GCTCGGACGA CGTCGAGCAA GCCACCGACC TGCCGATCTT CACGAGCAGC ACGAACGTAT GGGGCAACAA CACGACGACC GACCGGCAGA CGGTCGCCGC GGACATCGAC TATGGGCTCG CGTTGACTTG GGACTACTAC AGGACGACGC ACAACCGCAA CGGCATCTTC AACGACGGCC GCGGCGTGAG GAGCTACGCT CACGTCGTAT TCAACACGGG CAGCGGCACC ACCGGCGCGA ACGCGGCATG GCTGTCGTCG CGCGTGATGG TGTACGGCGA TGGCGATCCA GGCACCCGCC TGCCGAAACC CGTCGTTTCG GTCGATGTCG CCGGGCACGA GATGAGTCAC GGCGTGACCG AGGCCACCGC CAACCTGAAC TATTCGGGCG ACGCGGGCGG CCTGAACGAA TCGACGTCCG ACATTTTCGG CACGCTCGTG AAGTTCTACG CGAACAACCC GAACGATCCC GGCAATTACG TGATCGGTGC GCGCGTGACG AGCGGCGGCC TGCGCAAGAT GTACAAGCAG GATCTCGACG GCCGGTCGTT CAGCTGCTAC CCGTCCGGTG GCTTCTCGTG GTCTAATCCG CGCCACGATC CGCATTTCAC GTCGGGTGTC GGCAACCGCT TCTTCTACCT GCTGTCGGAA GGCCCGGTGG TACCGTCGAC CGATACCGGC CTGTCGAGGA CGCAGCTGGT GTGCAACGGC GACACGACCT TCAGTGGCCT GGGCCGGGAG AAAGCCGGCA AGATCTGGTA CCGGACACTG ACCGTGTACC TGAACGCCAA CTCGAGCTAC CCGAACGCAC GGCGTGCGTC GATCCAGGCA ACGAACGACC TGTATGGCGC GAACTCGGTC GAAAGTGCAA CGGTCGCGCG TGCCTGGAGT GCGGTCGGGG TGAATTGA
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Protein sequence | MKKLSRLLPI AAITIASLSA FAQAGDPSAT VDKALQLIQQ NPSAFSLATG GTARTLKFAG PQASAPTDGD QFQVRDVIVD PDGTEHVRFD RFHAGLPVIG GDVVVHSHRG QLKQASQTQL APINLAGTIG KVGNRSVVRN APDVGAARAK LIAAARFDSN VRRVDDAELV VFTRDVAPTL AYAVRVYGNA TDAHGDAVLY YIDARTGTVL DAQDLIKTAA ATGTGRSLYY GNLALTTDQT GTNAYRMLDP SRGGGSVYDG RGLSSDDVEQ ATDLPIFTSS TNVWGNNTTT DRQTVAADID YGLALTWDYY RTTHNRNGIF NDGRGVRSYA HVVFNTGSGT TGANAAWLSS RVMVYGDGDP GTRLPKPVVS VDVAGHEMSH GVTEATANLN YSGDAGGLNE STSDIFGTLV KFYANNPNDP GNYVIGARVT SGGLRKMYKQ DLDGRSFSCY PSGGFSWSNP RHDPHFTSGV GNRFFYLLSE GPVVPSTDTG LSRTQLVCNG DTTFSGLGRE KAGKIWYRTL TVYLNANSSY PNARRASIQA TNDLYGANSV ESATVARAWS AVGVN
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