Gene BamMC406_4301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4301 
Symbol 
ID6179907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1360434 
End bp1362131 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content65% 
IMG OID641684069 
Productpeptidase M4 thermolysin 
Protein accessionYP_001810980 
Protein GI172063329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT TGTCTCGTCT GCTGCCCATC GCCGCGATTA CCATTGCGAG TCTCAGCGCT 
TTTGCCCAGG CCGGCGACCC TTCGGCCACG GTCGACAAGG CGCTGCAACT GATCCAGCAG
AATCCGTCCG CCTTCAGTCT GGCTACCGGC GGCACAGCAC GCACGTTGAA GTTCGCGGGG
CCGCAAGCAA GCGCGCCGAC GGACGGAGAT CAGTTCCAGG TACGCGACGT GATCGTCGAT
CCCGATGGCA CCGAGCACGT TCGCTTCGAT CGCTTCCATG CGGGCCTGCC GGTGATAGGC
GGCGACGTCG TCGTCCATTC GCACCGAGGG CAGTTGAAGC AGGCGAGCCA GACCCAGCTC
GCACCGATCA ATCTCGCCGG CACGATCGGC AAGGTCGGAA ACCGCTCAGT GGTACGCAAC
GCGCCCGACG TAGGCGCGGC CAGGGCCAAG CTCATCGCGG CCGCGCGTTT CGACTCGAAC
GTGCGTCGCG TCGATGACGC GGAACTCGTC GTATTCACAC GCGACGTCGC GCCGACACTG
GCCTACGCGG TGCGCGTATA CGGCAACGCG ACCGATGCGC ACGGCGATGC CGTGCTGTAC
TACATCGATG CGCGCACCGG CACCGTGCTC GACGCCCAGG ACCTGATCAA GACCGCCGCC
GCGACCGGCA CCGGCCGCTC GCTGTACTAC GGCAACCTGG CGCTCACGAC GGACCAGACC
GGCACGAACG CTTACCGGAT GCTCGATCCC AGCCGCGGCG GCGGCTCGGT CTACGATGGC
CGCGGCCTGA GCTCGGACGA CGTCGAGCAA GCCACCGACC TGCCGATCTT CACGAGCAGC
ACGAACGTAT GGGGCAACAA CACGACGACC GACCGGCAGA CGGTCGCCGC GGACATCGAC
TATGGGCTCG CGTTGACTTG GGACTACTAC AGGACGACGC ACAACCGCAA CGGCATCTTC
AACGACGGCC GCGGCGTGAG GAGCTACGCT CACGTCGTAT TCAACACGGG CAGCGGCACC
ACCGGCGCGA ACGCGGCATG GCTGTCGTCG CGCGTGATGG TGTACGGCGA TGGCGATCCA
GGCACCCGCC TGCCGAAACC CGTCGTTTCG GTCGATGTCG CCGGGCACGA GATGAGTCAC
GGCGTGACCG AGGCCACCGC CAACCTGAAC TATTCGGGCG ACGCGGGCGG CCTGAACGAA
TCGACGTCCG ACATTTTCGG CACGCTCGTG AAGTTCTACG CGAACAACCC GAACGATCCC
GGCAATTACG TGATCGGTGC GCGCGTGACG AGCGGCGGCC TGCGCAAGAT GTACAAGCAG
GATCTCGACG GCCGGTCGTT CAGCTGCTAC CCGTCCGGTG GCTTCTCGTG GTCTAATCCG
CGCCACGATC CGCATTTCAC GTCGGGTGTC GGCAACCGCT TCTTCTACCT GCTGTCGGAA
GGCCCGGTGG TACCGTCGAC CGATACCGGC CTGTCGAGGA CGCAGCTGGT GTGCAACGGC
GACACGACCT TCAGTGGCCT GGGCCGGGAG AAAGCCGGCA AGATCTGGTA CCGGACACTG
ACCGTGTACC TGAACGCCAA CTCGAGCTAC CCGAACGCAC GGCGTGCGTC GATCCAGGCA
ACGAACGACC TGTATGGCGC GAACTCGGTC GAAAGTGCAA CGGTCGCGCG TGCCTGGAGT
GCGGTCGGGG TGAATTGA
 
Protein sequence
MKKLSRLLPI AAITIASLSA FAQAGDPSAT VDKALQLIQQ NPSAFSLATG GTARTLKFAG 
PQASAPTDGD QFQVRDVIVD PDGTEHVRFD RFHAGLPVIG GDVVVHSHRG QLKQASQTQL
APINLAGTIG KVGNRSVVRN APDVGAARAK LIAAARFDSN VRRVDDAELV VFTRDVAPTL
AYAVRVYGNA TDAHGDAVLY YIDARTGTVL DAQDLIKTAA ATGTGRSLYY GNLALTTDQT
GTNAYRMLDP SRGGGSVYDG RGLSSDDVEQ ATDLPIFTSS TNVWGNNTTT DRQTVAADID
YGLALTWDYY RTTHNRNGIF NDGRGVRSYA HVVFNTGSGT TGANAAWLSS RVMVYGDGDP
GTRLPKPVVS VDVAGHEMSH GVTEATANLN YSGDAGGLNE STSDIFGTLV KFYANNPNDP
GNYVIGARVT SGGLRKMYKQ DLDGRSFSCY PSGGFSWSNP RHDPHFTSGV GNRFFYLLSE
GPVVPSTDTG LSRTQLVCNG DTTFSGLGRE KAGKIWYRTL TVYLNANSSY PNARRASIQA
TNDLYGANSV ESATVARAWS AVGVN