Gene BamMC406_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4168 
Symbol 
ID6179809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1212056 
End bp1212973 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content73% 
IMG OID641683937 
ProductMarR family transcriptional regulator 
Protein accessionYP_001810848 
Protein GI172063197 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0180003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCG AAGACGAACT GGCGCTGCTC GATGCGATCC GCGCCACCGG CAGCCTGTCG 
CGCGCGGCCG CGCGGCTCGG CAAGGCGCCG TCGACGGTGT CGCACACCGC GCGGCAGCTC
GAAACGCGCT TCGACGCGCT GTTGTTCGAC CGGCGCGGCT ACCGGCTGCA GCTCACGCCG
GCCGGCCAGC TGCTGACCGA CGAGGCGTCG CGCCTCGCGC TGGACGTCGC ACGGCTCACG
CAGCGCGTGC GGCAGGTCGC GAACGGCTGG GAGGACCGGC TGACGATCGT CAGCGACGAG
GTGCTGGAGT TCGATACGCT GCTGCCGGTC GTTCGCGCGT TCGATGCGCT CGATTCGGGC
GTGTCGCTGC GTTTCACGCA CGAAGTGCTC GGCGGCACCT GGGAAGCGCT GCGCGATGGC
CGCGCGGACC TGGTCGTCGG CGCGACCAAC GAGCCGCCGG CGATTCCGGG CTTCAAATGG
TTCGAGCTCG GCGCGATGGA ATGGGTGTTC GCGGTATCGC CGCGCCATCC GCTGGCGGCG
GCGGGCGAGC GGCTCACCCG CGACGCGATC GGCGCGCATC GCGCGGTGGT CGTCGCGGAT
TCGTCGCGGC GGTCGGTCGG CCGTGTGTAC GGGCTGCTCG GCGGCCAGGC GGTGCTCGCG
GTGCCGTCGA TGCGCGCGAA GATCCTCGCG CAGCGCGACG GGCTCGGCGT CGGCTGGGTG
CCGCGCCGGC GCGTCGCGTC GCTGCTCGCG CGCGGCGAAC TCGTGGAGAA GGAAACGGCC
GATCCGCGCG AACCGAACGT GCTGTATGTC GCATGGCGCA GCGACCGCGA CGGCCGCGCG
CTGCAATGGT GGCTCGAGCA ACTGCGCGAA CCGCGGCTCG CGCAGCGGCT GCTCGACGGG
ATCGACGTGT CGGGCTGA
 
Protein sequence
MLSEDELALL DAIRATGSLS RAAARLGKAP STVSHTARQL ETRFDALLFD RRGYRLQLTP 
AGQLLTDEAS RLALDVARLT QRVRQVANGW EDRLTIVSDE VLEFDTLLPV VRAFDALDSG
VSLRFTHEVL GGTWEALRDG RADLVVGATN EPPAIPGFKW FELGAMEWVF AVSPRHPLAA
AGERLTRDAI GAHRAVVVAD SSRRSVGRVY GLLGGQAVLA VPSMRAKILA QRDGLGVGWV
PRRRVASLLA RGELVEKETA DPREPNVLYV AWRSDRDGRA LQWWLEQLRE PRLAQRLLDG
IDVSG