Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4133 |
Symbol | |
ID | 6179548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1172882 |
End bp | 1173685 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683903 |
Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
Protein accession | YP_001810814 |
Protein GI | 172063163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.148585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.769633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTC CGTCCAATGT CTTCAAGGCC GCGCTCGCGC GCGGCGACGC GCAGCTCGGG CTGTGGCTCG GCCTCGCGAA TCCGTACAGC GCGGAAGTCG TCGCGGGCGC CGGTTTCGAC TGGCTACTGA TCGACGGCGA ACATGCGCCG AACACGGTGC CGACGATCCT CGCGCAGTTG CAGGCGATCG CGCCGTATCC GTCGCATCCG GTCGTGCGCG TGCCGTGGAA CGATCCGGTG ATCGTCAAGC AGGTGCTCGA TCTCGGCGCG CAGACGCTGC TCGTGCCGAT GGTGCAGAGC GCGGACGAAG CGCGCGCGGC GGTGGCCGCG ACGCGTTATC CGCCGCACGG GATTCGCGGG GTCGGCAGTG CGCTCGCGCG CGCGTCGCGG TGGAATCGCG TCGGCGATTA CCTGCACCGC GCGAACGACG AGATGGCCGT GCTCGTGCAG GTCGAGACGC GCGCGGGGCT CGATGCGATC GATGCGATTG CACAGGTCGA AGGCGTGGAC GGCGTGTTCA TCGGGCCGGC CGACCTGGCG GCCGATCTCG GGCATCTCGG CAATCCGGGG CACCCGGACG TGCAGGCCGC GATCGACGGC GCGATCCGCA CGATCAAGGC GGCCGGCAAC GCGCCGGGCA TTCTGAGCGC GGATGAGGCG GCGGCGCGGC GGTATCTGGA AGCGGGGGCG CTGTTCGTCG CGGTCGGTGT GGATACGACG CTGCTGGCGA GAAGTGCGCA GGCGCTGGCG GCGCGGTTCA AGGAGAAGGG CGAGGCCGGG AAGGCGGGCG ACGGGACGTA TTGA
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Protein sequence | MQIPSNVFKA ALARGDAQLG LWLGLANPYS AEVVAGAGFD WLLIDGEHAP NTVPTILAQL QAIAPYPSHP VVRVPWNDPV IVKQVLDLGA QTLLVPMVQS ADEARAAVAA TRYPPHGIRG VGSALARASR WNRVGDYLHR ANDEMAVLVQ VETRAGLDAI DAIAQVEGVD GVFIGPADLA ADLGHLGNPG HPDVQAAIDG AIRTIKAAGN APGILSADEA AARRYLEAGA LFVAVGVDTT LLARSAQALA ARFKEKGEAG KAGDGTY
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