Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4107 |
Symbol | |
ID | 6180377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1141647 |
End bp | 1144085 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641683877 |
Product | beta-mannosidase |
Protein accession | YP_001810788 |
Protein GI | 172063137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.653904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCAA CGGCCGCGGG CATCATGCGC GGCCCGCTCG ACCTCCCCGC CGACGGCTGG ATCGCCGCCC CTGTCCCCGG CACGGTCGCG CAAGCGCTCG CGCTGGCCGG CCGGCATGAC GATATGGCTT CGCTCGACGA GCGCGATCAC TGGTATCGCG TCGAACTGCG CGGACACGGG CCGCGCGTGC TGCGCTTTCA CGGCCTCGCG ACGCTCGCCG ACGCATGGCT CGACGACACG CCGATCCTGC GCTCGGGCAG CATGTTCGTC GCGCATGACG TGCGCGTGTC GCTCGACGGC ACGCACCGGC TCACCGTCTG CTTCCGCGCC CTCGCGCCGC ACCTGCGCGA CGCGCGCACA TCGCGCCGTG CACGCTGGCG CACGCGGCTG GCCGAACCGG CGACGCTGCG CACCGTGCGC ACGTCGCTGC TCGGGCACAT GCCCGGCTGG TTTCCGCGCT GCGTGCCGAC CGGACCGTGG CGGCCCGTCG ACGTGCTCGA CCCGGCCGAC GGTCCGGTTC TCGTCCAGTG CGACCTGCAT GCGCGCCTCG ACGGCGACAC CGGCTGGCTC GATGCGGAGC TCGCGTTCGC CGCTCCGCTG CCCGCTGCGT TCGCGGCCCG GCTGTCGTGC GGCGAGCACC ACGCGACGCT CGAACGCAGC GGCGCTGACC GGCTGCGTGC GAGCGTCGCG GTGCCGAACG TGCGCCGCTG GTGGCCGCAC ACGCACGGCG AACCGGTGCT CTACGACGTC GCGCTGCACA TCGGCGCCGA ATGTCGGCCG CTCGGCGCGA CGGGTTTCCG CACGATCGAA CCGGACGCCG GCGACGACGG CAACGGGTTC GGGCTGCGCG TGAACGGCGT GCGCGTGTTC GCGCGCGGCG CATGCTGGAG CAGCGCCGCC CCGCTCGCGC TGCACGCGGA CGATGCGACC TATGCCCGTT TGCTCGGGTA CGCGCGCGAC GCCGGCTTCA ACATGATTCG AGTCGGCGGC ACGATGACCT ACGAGGCCGA CGCATTCCAT GCGTGGTGCG ACCGGCTCGG GCTGCTGGTC TGGCAGGACT TCATGTTCGC GAACTTCGAC TACGCGCTCG ACGATCGCGC GTTCGCCGAC GCGGTCGATC GCGAAGCCGA ACAGTTCCTC ACGCGCCACC GCGCGTCGCC GTCGCTCGCG GTGCTGTGCG GCGGCAGCGA GATCGCGCAG CAGGCCGCGA TGTCGGGGCT CGCGCCGAAG CAGCGCTTCC TCGAACTGAC CGCCGAACGC CTCGCCGGCC ATGCGGCGGC ACGCCGGCCC GACGCACTTT ACGTCCCCGA CTCGCCGGAC GGCGGCGCAC TGCCGTTCCA GCCACGCGAG CGCGTGTCGC ACTACTACGG CGTCGGCGCA TACCTGCGCC CGCTCGACGA CGCGCGCCGC GCCGACGTGC GCTTCGCGAG CGAATGCCTC GCGTTCGCGA ACGTGCCGTG CGACGCGATG CTCGCGAGCC TCGGTTGGCC CGGCGTTCAC GAGCCGCGCT GGAAGGCTGC GGTGCCGCGC GACCCCGGCA CGTCGTGGGA TTTCGACGAT ATTCGGGACC ACTATCTAAA CACACTGTAC GACGTGGCGC CCGACCGCCT GCGACGCGAG GATCCGTCGC GCTACTTCGA GCTGTCGCGC GCGGCGATCG CGGACCTGAT GCGCGACACC TTCGCCGAAT GGCGGCGCAC CGGCTCGCGC TGCGCGGGAG CGCTCGTCTG GCAGTTCCAG GACGTGATGC CGGGCGCCGG ATGGGGCTTG ATCGATGCGA CGCATCGGCC GAAATCGGCG TGGTATGCGC TGCGCCAGGT GCTTCAGCCG GTGCAGGTCC TGCTCGTCGA CGAAGGGTTG AACGGCCTCG ATGTGCACGT GATCAACGAA CGGCCGGCGC CGCTGTCGGC GGCCGTCGAG CTGGTCGCGC TGCGCGACGG CCGCACACCG GTCGCGCGGG CCGGCGGGCC CGTCCGGATC GCCGCGCACG ACACGGTGCG GCTCGGCTCG GCCGAATTGC TCGGCCGCTT CTTCGACTGG ACCTACGCGT ATCGCTTCGG GCCGTGCGAG CACGACACCG TCGTCGCGAC GTTGCGCGCG GACGACGGTA CGCTGCTGTC GCAGGCGTTC TACTTCCCGT CCCGCACGCA TCCTGCGGTG TTCGCACGCC GCGAGCCCGG CATCGACGCA TGCGTGTCGC GCATTGGCGA TACGTGGTAT GTCGACATCG GCACGCGCCA TGTCGCCCGT CACGTGCAGA TCGACGCGCC GGGCTTCGTG CCGCTCGACG ACTGGTTCGA TCTCGCCCCC GGCACGCCGG CACACGTCGC GCTCGTGCCG CTCGACGACA CGCGCGACCG GGCGGCGGCC GACACGCCGC CGAGCGTCGA TATCCGCGCG ATCAACGCCG CACGCACCGT GCGCGCCGCG CCGGGCTGA
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Protein sequence | MLATAAGIMR GPLDLPADGW IAAPVPGTVA QALALAGRHD DMASLDERDH WYRVELRGHG PRVLRFHGLA TLADAWLDDT PILRSGSMFV AHDVRVSLDG THRLTVCFRA LAPHLRDART SRRARWRTRL AEPATLRTVR TSLLGHMPGW FPRCVPTGPW RPVDVLDPAD GPVLVQCDLH ARLDGDTGWL DAELAFAAPL PAAFAARLSC GEHHATLERS GADRLRASVA VPNVRRWWPH THGEPVLYDV ALHIGAECRP LGATGFRTIE PDAGDDGNGF GLRVNGVRVF ARGACWSSAA PLALHADDAT YARLLGYARD AGFNMIRVGG TMTYEADAFH AWCDRLGLLV WQDFMFANFD YALDDRAFAD AVDREAEQFL TRHRASPSLA VLCGGSEIAQ QAAMSGLAPK QRFLELTAER LAGHAAARRP DALYVPDSPD GGALPFQPRE RVSHYYGVGA YLRPLDDARR ADVRFASECL AFANVPCDAM LASLGWPGVH EPRWKAAVPR DPGTSWDFDD IRDHYLNTLY DVAPDRLRRE DPSRYFELSR AAIADLMRDT FAEWRRTGSR CAGALVWQFQ DVMPGAGWGL IDATHRPKSA WYALRQVLQP VQVLLVDEGL NGLDVHVINE RPAPLSAAVE LVALRDGRTP VARAGGPVRI AAHDTVRLGS AELLGRFFDW TYAYRFGPCE HDTVVATLRA DDGTLLSQAF YFPSRTHPAV FARREPGIDA CVSRIGDTWY VDIGTRHVAR HVQIDAPGFV PLDDWFDLAP GTPAHVALVP LDDTRDRAAA DTPPSVDIRA INAARTVRAA PG
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