Gene BamMC406_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4097 
Symbol 
ID6179365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1126528 
End bp1128810 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content68% 
IMG OID641683867 
Productexopolysaccharide tyrosine-protein kinase 
Protein accessionYP_001810778 
Protein GI172063127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.139817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTT CGACCCTGCC TGACCCGCAC AGCGGGCCCG CCCTGCGGCC GTCCTATCCG 
GTGCGCCGCT ATTGGGGCAT GCTGTACGGC GGCCGGCGCC TGATCCTTTG CACGGCGCTC
GCGGGCGCGC TCGTCGGCGC CGTGTATGCG CTGTGCGCGG CGCCCGTCTA CCGGACCGAC
ATCCTGTTCC AGGTCGAGCA AAGCCCGACC GACTCGAAAC AGACGTCCCC GCCCGGCGAT
CCGTCGGCGG TGTTCGACCT GAAGACCGAC GCGTCGACCG AGATCGAGGT GCTGAAATCA
CGCGCCGTGC TCGACCGCGC GATCGACAGT ACCAACCTGG CCGTCGACGC GCGGCCGCAT
TACCTTCCGC TGATCGGCTG GCGGTTCGTG AACGCGGCCG ACGGGCTGTC CGCGCCGTTG
CCGGGCGGCT ACGTGTACGG CACCGAGCGC ATCGACGTGC CGACCTTCGA CGTACCGAAG
CGCCTGCTCG GCAAGCGCTT CGCGCTGACG CTCGGCGACG ACGGCGTCTA TACGCTGCAG
CGTACGGGCT GGTTCGGCCG GAAGGGGCCG GCATGGCAGG GCCGTATCGG GCAGCCGCTG
CATGTCGACA CACCGCAGGG GCCGCTCGAC ATCTTCGTGC GCGACGTGGC CGGCAAGCCC
GGCGCACGCT TCGACCTGAC GCGCTACAGC GATGAAGAGG CGACGGTCTG GCTGCAGAAG
AATGCGCTGA TCTCCGAGCG CGGCAAGCAG TCGAACATGA TCGGCGTGAC GCTCGACGGC
ATCGATCCCG TGCACGACAG CCGCGTGCTG AACGCGATCG GCGACGCGTA CCTGGCGCAG
AACACGCAGC GCAAGTCCGA GGCGGCCGAC AAGCTGATCC GCTTCATGGA TACCCAGCTG
CCGCAGCTGA AGGCGCAACT GGAACAGGCG GAAAACCGCT TCAACGCATT CCGTGCGTCG
CATGGCACCG TCAATACGAG TGACGAGGCG CTGGCATTGC GCCAGCAGTC GGTCGACATC
GAGACGCGCG TGCAGACGCT GCAGCAGCGG CGCGAGGAGT TGCTGACGCG CTTCATGCCG
AAGCATCCGG CCTTGGTGGC CGTCGATGCG CAGCTGGCCG ACGCGCAGCA TTCGCTCGAC
ACGACACGCA AGCAGATCCA GCAGTTGCCG ACCGTCGAGC AGGGCGTGCT GCAGCTGCAG
CGCGATGTGG CCGTCGATAC CGCGCTGTAC ACGAACCTGC TCAACACGCG CCAGCAGATG
ATCCTCGCGC GGGCCAGCAA GACCGGCACC GTGCGGATCG TCGATACGGC GAAGGTCGCC
GAGGAGCCGA TCGGCCCGCA TCGCGGAGTC GCGGTGATCG CGCTGCTGAT GCTGGGGCTG
CTGGCGGGCG CGGCGATCGT GATCGTCCGG CAGCGTGTCG TCGGCACGAT CGGCGACGCC
GAGGAAATCG AATGGACGAC GGGGCTGCCC GTGTTCGCGA CCGTGCCGCA CAGCGCGGTC
GCGGCGCAAC CGGAGTCGCG ACCGAAGTCC GGACGGCGCG GCATGCGCGC GCCGATGCCG
CCGATCGACG CGCAGGATGC GCACGACACG GCGCTCGAAG GCCTGCGCAA TTTCCGTGCG
GCACTGCAAT TGTCGATGCC GGACGCGTCG AATCCCGTCG TGCTGATTTC CGGGCCGACG
ACGGGCGTCG GCAAGTCGTT CGTCGCCGCG AATATCGCGT CGCTCGTCGG CGCGGCGAAA
CGGCGGGTGC TGCTAATCGA TGCGGACCTG CGCAAGGGTT CGCAGCACGA GCGGTTCCGC
CATAGCCGCG CGCCAGGCTT GTCGGACATC GTGACCGGCA CGCACGGGGG CGCCGAGACG
ATCAGGCGCG GGGTCGCGCC GGGCCTCGAT TTCATCCCGA TGGGCAGCAT CGTGCCGGAC
CCGGGCGAAC TGCTGCTGCA GCCCGCGCTC GCCGCACTGG TCGAGCAGGT CGCGGCGCGC
TACGACATGG TCGTGATCGA CGGGCCGCCG TTGCTGCCGG TGGCCGACGC GCTGGTGCTC
GGCCGTCTCG CGGGAACCGT ATTCCTCGTC GCGCGCAGCG GCGTGACGAC GCTGACCGAA
CTCGAGGAAA GCGCTCGACG GCTCGAACAC GCGCATATCG ATGTATGCGG CGTAGTCCTG
AACGATTACA AGGGCGCGCC GGGGCGGTAC GACTACGGCT ACAAGGATAT GAACACGCAT
CAGGCCGCGT CCGGATATAC GGCAGGGATC GCGTCGCGGC AACGGGTGGA ACGGGCGTCA
TGA
 
Protein sequence
MTSSTLPDPH SGPALRPSYP VRRYWGMLYG GRRLILCTAL AGALVGAVYA LCAAPVYRTD 
ILFQVEQSPT DSKQTSPPGD PSAVFDLKTD ASTEIEVLKS RAVLDRAIDS TNLAVDARPH
YLPLIGWRFV NAADGLSAPL PGGYVYGTER IDVPTFDVPK RLLGKRFALT LGDDGVYTLQ
RTGWFGRKGP AWQGRIGQPL HVDTPQGPLD IFVRDVAGKP GARFDLTRYS DEEATVWLQK
NALISERGKQ SNMIGVTLDG IDPVHDSRVL NAIGDAYLAQ NTQRKSEAAD KLIRFMDTQL
PQLKAQLEQA ENRFNAFRAS HGTVNTSDEA LALRQQSVDI ETRVQTLQQR REELLTRFMP
KHPALVAVDA QLADAQHSLD TTRKQIQQLP TVEQGVLQLQ RDVAVDTALY TNLLNTRQQM
ILARASKTGT VRIVDTAKVA EEPIGPHRGV AVIALLMLGL LAGAAIVIVR QRVVGTIGDA
EEIEWTTGLP VFATVPHSAV AAQPESRPKS GRRGMRAPMP PIDAQDAHDT ALEGLRNFRA
ALQLSMPDAS NPVVLISGPT TGVGKSFVAA NIASLVGAAK RRVLLIDADL RKGSQHERFR
HSRAPGLSDI VTGTHGGAET IRRGVAPGLD FIPMGSIVPD PGELLLQPAL AALVEQVAAR
YDMVVIDGPP LLPVADALVL GRLAGTVFLV ARSGVTTLTE LEESARRLEH AHIDVCGVVL
NDYKGAPGRY DYGYKDMNTH QAASGYTAGI ASRQRVERAS