| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4078 |
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| Symbol | |
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| ID | 6179628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1103414 |
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| End bp | 1105120 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683848 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001810759 |
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| Protein GI | 172063108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG4261] Predicted acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.724186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCTGCATCGT CATCCCGATC TACAACCATC GCGATGCGAT CGGCGGCACG
CTGGCGCGGC TGGTCGTGCA CGGCCAGCCG ATTCTGGTGG TCGACGACGG CAGCGACGAG
CCGACCCGGC GGGTGCTCGC CGCGCTTGCC GCGCAGTATG CCGGTTCCGT GACGTTGCTG
CGGTTGCCCG TCAACGGGGG AAAGGGGGCT GCGGTCATGG CCGGCATGCG TGCCGCGCGC
ACACGGGGAT ACCGGCATGC GATCCAGATC GATGCCGACG GCCAGCACGA TGCCGACGAC
GTGCCGAAGT TCGTGGCAGC CGCGCAGGCC GAGCCGGACG CCGTGATTCT CGGGCGGCCG
CGTTTCGACG ACAGCGTGCC GAAGGCGCGC CTGTACGGCC GCTATCTCAC GCACGTGTGG
GTATGGATCG AAACGCTGTC GCTGGACATT CCCGATGCTA TGTGCGGATT TCGTCTGTAT
CCGGTCGATG CCGTCTGCGA ACTGATCGAC ACGGTATCGA TGCCGACGCG GATGGCTTTC
GACAGCGAGA TCCTGGTCAG GCTGCACTGG CGAGGCCTGG CGTTCAGGAC GATCGCGACG
CGCGTCGTCT ATCCGGCCGA CGGCGTGTCG CATTTCGACG TCTGGCGCGA CAACGTGCGC
ATCAGCGCGA GCCACACGCG GCTCGTCGCC GGGATGCTCG TGCGCGCGCC GATGCTGCTG
ACGCGCCGGC TCATCGGCCG GCGCGCCGCG CCGCCGACCG AGCGCACGCG CGCATGGTGG
CGTATGCCGG AACGCGGCAG CCGGATCGGC ATGGCGTTGC TGGCCCTGAG CTGCCGCTGG
TTCGGCAAGG ATTTCACGTC GCTCTGGCTG CATCCGATCG TCGGCTATTT CGTGCTGACG
AACCGCACGG CGCGCACCGC GTCGCATGCG TACATCGCGC GCCTGCGCGA CGCGCAAGCG
GCGGCCGTGC CGAAGCCGGG ATGGCGCAGT GCGTATCGGC ACATGCTTGC CTTTGCGCAG
GCGGGATTCG ACAAGTTCGT CGCATGGTCC GGCCGTCTCG ACGAACTCGA CGTGCGCTTC
GACGATTCAT CTGCATTCGA TGCGCTCGCC GCAAGCGGGC GCGGCGCGCT TGTGATCGGC
GCGCATCTGG GCAACCTCGA GATGACACGT GCGCTTGCGC TGCGCGATGC GCATACGAAG
GTGACGGCGA TCGTCTATAC CGAACACGCG AAGCGCTTTA CCGGTGTGCT GGCCGGCGCG
AACCAGGCAT TCGGCAAGCA GCTCGTCGAG GTGTCGGACT TCGGGCCGGA TACGGCGATG
ATGATGCAGT CGCGGATCGA TGCGGGCGAG CTGCTCGTGA TCGTCGGCGA CCGCGTGCCG
CCGCATGATT CGGGGAAAAC GGTCGACGCC CGTTTTCTCG ACGCGCAGGC CCCGTTCGCG
CAGGGCCCGT ACATCCTCGC CCATGCGCTC GGCTGTCCGG TCTACCTGTT CTTCTGTCTG
AAGGAACAGC GCGGCTACCG GCTCTATTTC GAGTCGTTCG CAGACCGAAT CGAACTGCCG
CGCCGCGAGC GCGCGAGTCA CGTCGCGCAA TGGGCGCAGC GCTATGCCGC GCGGCTCGAA
CACTATTGCC GCAAGGCTCC CTATCAATGG TTCAACTTCT TCGATTTCTG GGCGCGGCCC
GATGGAGGTC CGCGTGGCCG AGCATGA
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| Protein sequence | MSDTCIVIPI YNHRDAIGGT LARLVVHGQP ILVVDDGSDE PTRRVLAALA AQYAGSVTLL
RLPVNGGKGA AVMAGMRAAR TRGYRHAIQI DADGQHDADD VPKFVAAAQA EPDAVILGRP
RFDDSVPKAR LYGRYLTHVW VWIETLSLDI PDAMCGFRLY PVDAVCELID TVSMPTRMAF
DSEILVRLHW RGLAFRTIAT RVVYPADGVS HFDVWRDNVR ISASHTRLVA GMLVRAPMLL
TRRLIGRRAA PPTERTRAWW RMPERGSRIG MALLALSCRW FGKDFTSLWL HPIVGYFVLT
NRTARTASHA YIARLRDAQA AAVPKPGWRS AYRHMLAFAQ AGFDKFVAWS GRLDELDVRF
DDSSAFDALA ASGRGALVIG AHLGNLEMTR ALALRDAHTK VTAIVYTEHA KRFTGVLAGA
NQAFGKQLVE VSDFGPDTAM MMQSRIDAGE LLVIVGDRVP PHDSGKTVDA RFLDAQAPFA
QGPYILAHAL GCPVYLFFCL KEQRGYRLYF ESFADRIELP RRERASHVAQ WAQRYAARLE
HYCRKAPYQW FNFFDFWARP DGGPRGRA
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