Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4078 |
Symbol | |
ID | 6179628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1103414 |
End bp | 1105120 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683848 |
Product | glycosyl transferase family protein |
Protein accession | YP_001810759 |
Protein GI | 172063108 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG4261] Predicted acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.724186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCTGCATCGT CATCCCGATC TACAACCATC GCGATGCGAT CGGCGGCACG CTGGCGCGGC TGGTCGTGCA CGGCCAGCCG ATTCTGGTGG TCGACGACGG CAGCGACGAG CCGACCCGGC GGGTGCTCGC CGCGCTTGCC GCGCAGTATG CCGGTTCCGT GACGTTGCTG CGGTTGCCCG TCAACGGGGG AAAGGGGGCT GCGGTCATGG CCGGCATGCG TGCCGCGCGC ACACGGGGAT ACCGGCATGC GATCCAGATC GATGCCGACG GCCAGCACGA TGCCGACGAC GTGCCGAAGT TCGTGGCAGC CGCGCAGGCC GAGCCGGACG CCGTGATTCT CGGGCGGCCG CGTTTCGACG ACAGCGTGCC GAAGGCGCGC CTGTACGGCC GCTATCTCAC GCACGTGTGG GTATGGATCG AAACGCTGTC GCTGGACATT CCCGATGCTA TGTGCGGATT TCGTCTGTAT CCGGTCGATG CCGTCTGCGA ACTGATCGAC ACGGTATCGA TGCCGACGCG GATGGCTTTC GACAGCGAGA TCCTGGTCAG GCTGCACTGG CGAGGCCTGG CGTTCAGGAC GATCGCGACG CGCGTCGTCT ATCCGGCCGA CGGCGTGTCG CATTTCGACG TCTGGCGCGA CAACGTGCGC ATCAGCGCGA GCCACACGCG GCTCGTCGCC GGGATGCTCG TGCGCGCGCC GATGCTGCTG ACGCGCCGGC TCATCGGCCG GCGCGCCGCG CCGCCGACCG AGCGCACGCG CGCATGGTGG CGTATGCCGG AACGCGGCAG CCGGATCGGC ATGGCGTTGC TGGCCCTGAG CTGCCGCTGG TTCGGCAAGG ATTTCACGTC GCTCTGGCTG CATCCGATCG TCGGCTATTT CGTGCTGACG AACCGCACGG CGCGCACCGC GTCGCATGCG TACATCGCGC GCCTGCGCGA CGCGCAAGCG GCGGCCGTGC CGAAGCCGGG ATGGCGCAGT GCGTATCGGC ACATGCTTGC CTTTGCGCAG GCGGGATTCG ACAAGTTCGT CGCATGGTCC GGCCGTCTCG ACGAACTCGA CGTGCGCTTC GACGATTCAT CTGCATTCGA TGCGCTCGCC GCAAGCGGGC GCGGCGCGCT TGTGATCGGC GCGCATCTGG GCAACCTCGA GATGACACGT GCGCTTGCGC TGCGCGATGC GCATACGAAG GTGACGGCGA TCGTCTATAC CGAACACGCG AAGCGCTTTA CCGGTGTGCT GGCCGGCGCG AACCAGGCAT TCGGCAAGCA GCTCGTCGAG GTGTCGGACT TCGGGCCGGA TACGGCGATG ATGATGCAGT CGCGGATCGA TGCGGGCGAG CTGCTCGTGA TCGTCGGCGA CCGCGTGCCG CCGCATGATT CGGGGAAAAC GGTCGACGCC CGTTTTCTCG ACGCGCAGGC CCCGTTCGCG CAGGGCCCGT ACATCCTCGC CCATGCGCTC GGCTGTCCGG TCTACCTGTT CTTCTGTCTG AAGGAACAGC GCGGCTACCG GCTCTATTTC GAGTCGTTCG CAGACCGAAT CGAACTGCCG CGCCGCGAGC GCGCGAGTCA CGTCGCGCAA TGGGCGCAGC GCTATGCCGC GCGGCTCGAA CACTATTGCC GCAAGGCTCC CTATCAATGG TTCAACTTCT TCGATTTCTG GGCGCGGCCC GATGGAGGTC CGCGTGGCCG AGCATGA
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Protein sequence | MSDTCIVIPI YNHRDAIGGT LARLVVHGQP ILVVDDGSDE PTRRVLAALA AQYAGSVTLL RLPVNGGKGA AVMAGMRAAR TRGYRHAIQI DADGQHDADD VPKFVAAAQA EPDAVILGRP RFDDSVPKAR LYGRYLTHVW VWIETLSLDI PDAMCGFRLY PVDAVCELID TVSMPTRMAF DSEILVRLHW RGLAFRTIAT RVVYPADGVS HFDVWRDNVR ISASHTRLVA GMLVRAPMLL TRRLIGRRAA PPTERTRAWW RMPERGSRIG MALLALSCRW FGKDFTSLWL HPIVGYFVLT NRTARTASHA YIARLRDAQA AAVPKPGWRS AYRHMLAFAQ AGFDKFVAWS GRLDELDVRF DDSSAFDALA ASGRGALVIG AHLGNLEMTR ALALRDAHTK VTAIVYTEHA KRFTGVLAGA NQAFGKQLVE VSDFGPDTAM MMQSRIDAGE LLVIVGDRVP PHDSGKTVDA RFLDAQAPFA QGPYILAHAL GCPVYLFFCL KEQRGYRLYF ESFADRIELP RRERASHVAQ WAQRYAARLE HYCRKAPYQW FNFFDFWARP DGGPRGRA
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