Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4069 |
Symbol | |
ID | 6180140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1096715 |
End bp | 1097665 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641683839 |
Product | hypothetical protein |
Protein accession | YP_001810750 |
Protein GI | 172063099 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00361553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACA ACGATACCCG CACCGAGACC GACAACGCCA CCGATATGGC GTCGGGCGAG TCGCGCCGGC ACCATTTCGA GGAAGACCTC GTCGATGCGT ACGACGAAGA ACTCGAAATG GAACTTGACG ACCGCCGTTT CGATAGCGGC GAGGATCTGC TGTTCTCGCC GGAGCGCCGC GAAGCGCGCA AGCAGTATTT CCGCGAGCTG TTCCGGCTGC AGGGCGAGCT CGTGAAGCTG CAGGACTGGG TCGTGAGCAC GGGGCATCGC CTCGTCGTGA TTTTCGAGGG GCGCGACGCG GCAGGCAAGG GCGGCGCGAT CAAGCGCATC ACGCAGCGCC TGAACCCGCG CGTGTGCCGC GTGGCGGCGC TGCCCGCGCC GAACAACCGC GAGCGCACGC AATGGTATTT CCAGCGCTAT GTCGCGCATC TGCCGGCCGG CGGCGAAATC GTGCTGTTCG ATCGCAGCTG GTACAACCGC GCAGGCGTCG AGCGCGTGAT GAATTTCTGT ACCGATGACG AGTACGAGGA ATTTTTCCGT TCGGTACCCG AATTCGAGAA GATGCTGGTG CGCAGCGGGA TCCAGATCGT CAAGTACTGG TTTTCGATCA CAGATCGCGA GCAGGAAGTG CGCTTCCAGA GCCGGATCCA GGATCCGCTG AAGCAGTGGA AGCTGAGCCC GATGGATCTG GAGAGCCGCC GCCGCTGGGA AGCCTATACG GCCGCGAAGG AAGAAATGCT GCAGCGCACG CATATCCCCG AAGCGCCGTG GTGGGTCGTG CAGGCGGTCG ACAAGAAGCG CGCGCGCCTG AACTGCATCA GCCATCTGCT GACCCAGGTG CCGTATCACG AGGTGCCGCG CCCGACGATC GATCTGCCGC AGCGCGAGCA TCACGAGGAC TACATTCGGC GTCCGGTGCC GGACAGCATG ATCGTCCCGG ACGTTTATTG A
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Protein sequence | MGDNDTRTET DNATDMASGE SRRHHFEEDL VDAYDEELEM ELDDRRFDSG EDLLFSPERR EARKQYFREL FRLQGELVKL QDWVVSTGHR LVVIFEGRDA AGKGGAIKRI TQRLNPRVCR VAALPAPNNR ERTQWYFQRY VAHLPAGGEI VLFDRSWYNR AGVERVMNFC TDDEYEEFFR SVPEFEKMLV RSGIQIVKYW FSITDREQEV RFQSRIQDPL KQWKLSPMDL ESRRRWEAYT AAKEEMLQRT HIPEAPWWVV QAVDKKRARL NCISHLLTQV PYHEVPRPTI DLPQREHHED YIRRPVPDSM IVPDVY
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